Gene

ttc9c

ID

ZDB-GENE-040426-1053

Name

tetratricopeptide repeat domain 9C

Symbol

ttc9c Nomenclature History

Previous Names

im:7142077
zgc:56497

Type

protein_coding_gene

Location

Chr: 14 Mapping Details/Browsers

Description

Involved in cilium assembly; determination of heart left/right asymmetry; and otolith morphogenesis. Orthologous to human TTC9C (tetratricopeptide repeat domain 9C).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

IMAGE:7142077 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: 3 figures from Xu et al., 2015
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With ttc9c Human Ortholog

No data available

Associated With ttc9c Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR039663	AIP/AIPL1/TTC9
Homologous_superfamily	IPR011990	Tetratricopeptide-like helical domain superfamily

Domain Details Per Protein

Protein	Length	AIP/AIPL1/TTC9	Tetratricopeptide-like helical domain superfamily
UniProtKB:Q7ZUI3 InterPro	217

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	ttc9c-201 (1) Ensembl	Havana	1071 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations