Gene

ngdn

ID

ZDB-GENE-031030-13

Name

neuroguidin, EIF4E binding protein

Symbol

ngdn Nomenclature History

Previous Names

zgc:66416

Type

protein_coding_gene

Location

Chr: 24 Mapping Details/Browsers

Description

Predicted to be involved in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Predicted to localize to nucleolus and small-subunit processome. Orthologous to human NGDN (neuroguidin).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

2 figures from 2 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

MGC:66416 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With ngdn Human Ortholog

No data available

Associated With ngdn Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR007146	Sas10/Utp3/C1D

Domain Details Per Protein

Protein	Length	Sas10/Utp3/C1D
UniProtKB:F1REQ4 InterPro	315
UniProtKB:Q6PFJ1 InterPro	315

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	ngdn-201 (1) Ensembl	Havana	3262 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	ngdn-002 (1) Ensembl	Havana	890 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	ngdn-003 (1) Ensembl	Havana	623 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	ngdn-004 (1) Ensembl	Havana	682 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations