Gene

rrp8

ID
ZDB-GENE-030131-8898
Name
ribosomal RNA processing 8
Symbol
rrp8 Nomenclature History
Previous Names
  • fk33d07
  • si:ch211-149e23.3
  • si:ch211-152b13.1 (1)
  • wu:fk33d07 (1)
Type
protein_coding_gene
Location
Chr: 15 Mapping Details/Browsers
Description
Predicted to have methylated histone binding activity. Predicted to be involved in cellular response to glucose starvation; chromatin silencing at rDNA; and regulation of transcription by glucose. Predicted to localize to chromatin silencing complex; nucleolus; and rDNA heterochromatin. Orthologous to human RRP8 (ribosomal RNA processing 8).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
sa14445Allele with one point mutationUnknownPremature StopENU
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Sequence Targeting Reagents
No data available
Human Disease
Associated With rrp8 Human Ortholog
No data available
Associated With rrp8 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Family IPR007823 Ribosomal RNA processing protein 8
Homologous_superfamily IPR029063 S-adenosyl-L-methionine-dependent methyltransferase superfamily
Homologous_superfamily IPR042036 Ribosomal RNA-processing protein 8, N-terminal domain
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Domain Details Per Protein
Protein Length Ribosomal RNA processing protein 8 Ribosomal RNA-processing protein 8, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferase superfamily
UniProtKB:F1R692 533
UniProtKB:A0A8M6YSH0 440
UniProtKB:B0R0L1 533
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Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 15
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA rrp8-203 (1) Ensembl 1,962 nt
mRNA rrp8-204 (1) Ensembl 420 nt
ncRNA si:ch211-149e23.3-002 (1) Ensembl 769 nt
ncRNA si:ch211-149e23.3-003 (1) Ensembl 475 nt
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Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACCH211-149E23ZFIN Curated Data
Contained inBACCH211-152B13ZFIN Curated Data
EncodesESTfk33d07
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Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanRRP811
Phylogenetic tree (1)
Amino acid sequence comparison (1)
MouseRrp87
Conserved genome location (synteny) (1)
Phylogenetic tree (1)
Amino acid sequence comparison (1)
Citations