Gene

xpc

ID
ZDB-GENE-030131-8461
Name
xeroderma pigmentosum, complementation group C
Symbol
xpc Nomenclature History
Previous Names
  • wu:fb12d05
  • wu:fb12d09
  • zgc:113032
Type
protein_coding_gene
Location
Chr: 8 Mapping Details/Browsers
Description
Predicted to have damaged DNA binding activity and single-stranded DNA binding activity. Predicted to be involved in mismatch repair and nucleotide-excision repair. Predicted to localize to XPC complex; cytoplasm; and nucleotide-excision repair factor 2 complex. Human ortholog(s) of this gene implicated in pancreatic cancer; serous cystadenocarcinoma; xeroderma pigmentosum; and xeroderma pigmentosum group C. Is expressed in liver. Orthologous to human XPC (XPC complex subunit, DNA damage recognition and repair factor).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
3 figures from 3 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With xpc Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
xeroderma pigmentosum group C Alliance Xeroderma pigmentosum, group C 278720
Associated With xpc Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR018325 Rad4/PNGase transglutaminase-like fold
Domain IPR018326 Rad4 beta-hairpin domain 1
Domain IPR018327 Rad4 beta-hairpin domain 2
Domain IPR018328 Rad4 beta-hairpin domain 3
Family IPR004583 DNA repair protein Rad4
Family IPR018026 DNA repair protein Rad4-like
Homologous_superfamily IPR036985 Transglutaminase-like superfamily
Homologous_superfamily IPR038765 Papain-like cysteine peptidase superfamily
Homologous_superfamily IPR042488 Rad4, beta-hairpin domain 3 superfamily
Domain Details Per Protein
Protein Length DNA repair protein Rad4 DNA repair protein Rad4-like Papain-like cysteine peptidase superfamily Rad4 beta-hairpin domain 1 Rad4 beta-hairpin domain 2 Rad4 beta-hairpin domain 3 Rad4, beta-hairpin domain 3 superfamily Rad4/PNGase transglutaminase-like fold Transglutaminase-like superfamily
UniProtKB:A0A8M9PQU6 844
UniProtKB:Q1LVE4 879
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations