Gene

fdxacb1

ID
ZDB-GENE-030131-8403
Name
ferredoxin-fold anticodon binding domain containing 1
Symbol
fdxacb1 Nomenclature History
Previous Names
  • fb11b09
  • si:dkey-71l1.3
  • wu:fb11b09
Type
protein_coding_gene
Location
Chr: 5 Mapping Details/Browsers
Description
Predicted to have rRNA (uridine-N3-)-methyltransferase activity. Predicted to be involved in rRNA base methylation. Predicted to localize to cytoplasm. Orthologous to human FDXACB1 (ferredoxin-fold anticodon binding domain containing 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With fdxacb1 Human Ortholog
No data available
Associated With fdxacb1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR005121 Ferrodoxin-fold anticodon-binding domain
Domain IPR019446 25S rRNA (uridine-N(3))-methyltransferase BMT5-like
Homologous_superfamily IPR029063 S-adenosyl-L-methionine-dependent methyltransferase superfamily
Homologous_superfamily IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily
Homologous_superfamily IPR045864 Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)
Domain Details Per Protein
Protein Length 25S rRNA (uridine-N(3))-methyltransferase BMT5-like Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) Ferrodoxin-fold anticodon-binding domain Ferrodoxin-fold anticodon-binding domain superfamily S-adenosyl-L-methionine-dependent methyltransferase superfamily
UniProtKB:A5PMV5 582
Transcripts
Genome Browsers
Type Name Annotation Method Length (nt) Analysis
mRNA fdxacb1-201 (1) Havana 1905 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations