Gene

arhgap42a

ID

ZDB-GENE-030131-8077

Name

Rho GTPase activating protein 42a

Symbol

arhgap42a Nomenclature History

Previous Names

fj51b01
si:rp71-1p14.10 (1)
wu:fj51b01 (1)

Type

protein_coding_gene

Location

Chr: 21 Mapping Details/Browsers

Description

Predicted to have GTPase activator activity. Predicted to be involved in signal transduction. Orthologous to human ARHGAP42 (Rho GTPase activating protein 42).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2005

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

eu1120 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With arhgap42a Human Ortholog

No data available

Associated With arhgap42a Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000198	Rho GTPase-activating protein domain
Domain	IPR001452	SH3 domain
Domain	IPR001849	Pleckstrin homology domain
Domain	IPR004148	BAR domain
Domain	IPR047225	GRAF, PH domain
Family	IPR047234	GRAF family
Homologous_superfamily	IPR008936	Rho GTPase activation protein
Homologous_superfamily	IPR011993	PH-like domain superfamily
Homologous_superfamily	IPR027267	AH/BAR domain superfamily
Homologous_superfamily	IPR036028	SH3-like domain superfamily

Domain Details Per Protein

Protein	Length	AH/BAR domain superfamily	BAR domain	GRAF family	GRAF, PH domain	PH-like domain superfamily	Pleckstrin homology domain	Rho GTPase-activating protein domain	Rho GTPase activation protein	SH3 domain	SH3-like domain superfamily
UniProtKB:I3ITG1 InterPro	880
UniProtKB:Q6ZM89 InterPro	805
UniProtKB:A0A8M9PU04 InterPro	900

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	arhgap42a-201 (1) Ensembl	Ensembl	3,880 nt	Select Tool
mRNA	arhgap42a-203 (1) Ensembl	Ensembl	3,948 nt	Select Tool ZFIN BLAST
ncRNA	arhgap42a-002 (1) Ensembl	Ensembl	676 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations