Gene

lrrfip2

ID

ZDB-GENE-030131-7781

Name

leucine rich repeat (in FLII) interacting protein 2

Symbol

lrrfip2 Nomenclature History

Previous Names

wu:fj34c02
zgc:113956

Type

protein_coding_gene

Location

Chr: 13 Mapping Details/Browsers

Description

Predicted to be involved in regulation of transcription, DNA-templated. Predicted to localize to integral component of membrane. Is expressed in hatching gland; myotome; pectoral fin; and somite. Orthologous to human LRRFIP2 (LRR binding FLII interacting protein 2).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

6 figures from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

MGC:63771 (4 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With lrrfip2 Human Ortholog

No data available

Associated With lrrfip2 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR019139	Leucine-rich repeat flightless-interacting protein 1/2

Domain Details Per Protein

Protein	Length	Leucine-rich repeat flightless-interacting protein 1/2
UniProtKB:A0A8M2BHE2 InterPro	470
UniProtKB:A0A8M2BGV2 InterPro	494
UniProtKB:A0A8M6Z935 InterPro	727
UniProtKB:A0A8M9PXP5 InterPro	720
UniProtKB:A0A8M9QNB1 InterPro	635
UniProtKB:A0A8M9QJK5 InterPro	463
UniProtKB:A0A8M9QF96 InterPro	696
UniProtKB:A0A8M2BGT5 InterPro	751
UniProtKB:A0A8M6Z279 InterPro	662
UniProtKB:A0A8M9PXQ2 InterPro	439
UniProtKB:A0A8M9Q9K7 InterPro	700
UniProtKB:Q6PGV0 InterPro	405
UniProtKB:A0A8M2BGW9 InterPro	686
UniProtKB:A0A0R4IMS4 InterPro	429

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	lrrfip2-205 (1) Ensembl	Ensembl	1,006 nt	Select Tool ZFIN BLAST
mRNA	lrrfip2-201 (1) Ensembl	Ensembl	1,235 nt	Select Tool ZFIN BLAST
mRNA	lrrfip2-202 (1) Ensembl	Ensembl	2,242 nt	Select Tool ZFIN BLAST
mRNA	lrrfip2-203 (1) Ensembl	Ensembl	509 nt	Select Tool ZFIN BLAST
mRNA	lrrfip2-206 (1) Ensembl	Ensembl	2,326 nt	Select Tool ZFIN BLAST
ncRNA	lrrfip2-004 (1) Ensembl	Ensembl	529 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations