Gene

prkab1b

ID

ZDB-GENE-030131-7172

Name

protein kinase, AMP-activated, beta 1 non-catalytic subunit, b

Symbol

prkab1b Nomenclature History

Previous Names

prkab1
etID37891.8 (1)
wu:fk93d05
wu:fw87e09
zgc:56652 (1)
zgc:76975

Type

protein_coding_gene

Location

Chr: 8 Mapping Details/Browsers

Description

Predicted to enable protein kinase binding activity. Predicted to be involved in signal transduction. Predicted to act upstream of or within lipid metabolic process and phosphorylation. Predicted to be part of nucleotide-activated protein kinase complex. Predicted to be active in cytoplasm and nucleus. Orthologous to human PRKAB1 (protein kinase AMP-activated non-catalytic subunit beta 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

MGC:56652 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With prkab1b Human Ortholog

No data available

Associated With prkab1b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR006828	Association with the SNF1 complex (ASC) domain
Domain	IPR032640	AMP-activated protein kinase, glycogen-binding domain
Family	IPR050827	CRP1/MDG1 DNA-binding & kinase subunit
Homologous_superfamily	IPR013783	Immunoglobulin-like fold
Homologous_superfamily	IPR014756	Immunoglobulin E-set
Homologous_superfamily	IPR037256	ASC domain superfamily

Domain Details Per Protein

Protein	Additional Resources	Length	AMP-activated protein kinase, glycogen-binding domain	ASC domain superfamily	Association with the SNF1 complex (ASC) domain	CRP1/MDG1 DNA-binding & kinase subunit	Immunoglobulin E-set	Immunoglobulin-like fold
UniProtKB:Q6NY31	InterPro	260

Transcripts

Genome Browsers

NCBI

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	prkab1b-201 (1) Ensembl	Ensembl		1,305 nt	Select Tool ZFIN BLAST
mRNA	prkab1b-202 (1) Ensembl	Ensembl		946 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations