ZFIN is now using GRCz12tu for Genomic Data
Gene
tnfaip1
- ID
- ZDB-GENE-030131-5610
- Name
- tumor necrosis factor, alpha-induced protein 1 (endothelial)
- Symbol
- tnfaip1 Nomenclature History
- Previous Names
-
- wu:fi06b02
- zgc:55302
- Type
- protein_coding_gene
- Location
- Chr: 15 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Acts upstream of or within regulation of nervous system development. Predicted to be located in endosome and nucleus. Is expressed in head. Orthologous to human TNFAIP1 (TNF alpha induced protein 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 3 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:55302 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- 4 figures from Huang et al., 2023
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | BTB/POZ domain | BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 1-3 | Potassium channel tetramerisation-type BTB domain | SKP1/BTB/POZ domain superfamily |
|---|---|---|---|---|---|---|
| UniProtKB:F1R5K5 | InterPro | 320 | ||||
| UniProtKB:Q7ZYX6 | InterPro | 320 | ||||
| UniProtKB:A0AC58HA49 | InterPro | 320 | ||||
| UniProtKB:A0AC58HA55 | InterPro | 320 | ||||
| UniProtKB:A0AC58HA58 | InterPro | 320 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| aberrant processed transcript |
tnfaip1-202
(1)
|
Ensembl | 827 nt | ||
| mRNA |
tnfaip1-201
(1)
|
Ensembl | 1,928 nt | ||
| mRNA |
tnfaip1-203
(1)
|
Ensembl | 765 nt | ||
| mRNA |
tnfaip1-204
(1)
|
Ensembl | 873 nt | ||
| mRNA |
tnfaip1-205
(1)
|
Ensembl | 994 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers