Gene

ptprsa

ID

ZDB-GENE-020107-3

Name

protein tyrosine phosphatase receptor type Sa

Symbol

ptprsa Nomenclature History

Previous Names

ptprs
RPTP[s] (1)
zf-RPTP[s] (1)

Type

protein_coding_gene

Location

Chr: 22 Mapping Details/Browsers

Description

Predicted to have protein tyrosine phosphatase activity. Involved in olfactory bulb development. Predicted to localize to integral component of membrane. Is expressed in head and nervous system. Orthologous to human PTPRS (protein tyrosine phosphatase receptor type S).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

4 figures from 3 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With ptprsa Human Ortholog

No data available

Associated With ptprsa Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Active_site	IPR016130	Protein-tyrosine phosphatase, active site
Domain	IPR000242	Tyrosine-specific protein phosphatase, PTPase domain
Domain	IPR000387	Tyrosine-specific protein phosphatases domain
Domain	IPR003595	Protein-tyrosine phosphatase, catalytic
Domain	IPR003598	Immunoglobulin subtype 2
Domain	IPR003599	Immunoglobulin subtype
Domain	IPR003961	Fibronectin type III
Domain	IPR007110	Immunoglobulin-like domain
Domain	IPR013098	Immunoglobulin I-set
Homologous_superfamily	IPR013783	Immunoglobulin-like fold
Homologous_superfamily	IPR029021	Protein-tyrosine phosphatase-like
Homologous_superfamily	IPR036116	Fibronectin type III superfamily
Homologous_superfamily	IPR036179	Immunoglobulin-like domain superfamily

Domain Details Per Protein

Protein	Length	Fibronectin type III	Fibronectin type III superfamily	Immunoglobulin I-set	Immunoglobulin-like domain	Immunoglobulin-like domain superfamily	Immunoglobulin-like fold	Immunoglobulin subtype	Immunoglobulin subtype 2	Protein-tyrosine phosphatase, active site	Protein-tyrosine phosphatase, catalytic	Protein-tyrosine phosphatase-like	Tyrosine-specific protein phosphatase, PTPase domain	Tyrosine-specific protein phosphatases domain
UniProtKB:A0A8M9PJZ6 InterPro	1520
UniProtKB:A0A8M9PJY7 InterPro	1928
UniProtKB:A0A8M9PS80 InterPro	1920
UniProtKB:A0A8M9PVP8 InterPro	1936
UniProtKB:A0A8M9P4I5 InterPro	1944
UniProtKB:A0A8M9P4K6 InterPro	1498
UniProtKB:A0A8M9PE92 InterPro	1928
UniProtKB:A0A8M9P4J6 InterPro	1923
UniProtKB:A0A8M9PJX4 InterPro	1945
UniProtKB:A0A8M9PVQ7 InterPro	1533
UniProtKB:A0A8M9P4J3 InterPro	1929
UniProtKB:A0A8M9PJY3 InterPro	1936
UniProtKB:A0A8M9PS75 InterPro	1530
UniProtKB:A0A8M9PVR5 InterPro	1506
UniProtKB:A0A8M9PS86 InterPro	1518
UniProtKB:A0A8M9PK04 InterPro	1512
UniProtKB:A0A8M9PEA7 InterPro	1916
UniProtKB:A0A8M9PVR1 InterPro	1905
UniProtKB:A0A8M9PVP4 InterPro	1942
UniProtKB:A0A8M9PK00 InterPro	1502
UniProtKB:A0A8M9P4K2 InterPro	1901
UniProtKB:A0A8M9PE85 InterPro	1943
UniProtKB:A0A8M9P4J0 InterPro	1940
UniProtKB:A0A8M9PE98 InterPro	1923
UniProtKB:A0A8M9PS70 InterPro	1924
UniProtKB:A0A8M9P4J8 InterPro	1529
UniProtKB:A0A8M9PVQ3 InterPro	1927
UniProtKB:A0A8M9PEB3 InterPro	1513
UniProtKB:A0A8M9PEA2 InterPro	1524
UniProtKB:A0A8M9PS58 InterPro	1941
UniProtKB:A0A8M9PJZ1 InterPro	1831
UniProtKB:A0A8M9PS56 InterPro	1944
UniProtKB:A0A8M9PE90 InterPro	1939
UniProtKB:A0A8M9PS65 InterPro	1932
UniProtKB:A0A8M9PJX8 InterPro	1942

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	ptprsa-202 (1) Ensembl	Havana	508 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ptprsa-203 (1) Ensembl	Havana	6210 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations