Gene

nipsnap1

ID
ZDB-GENE-991008-17
Name
nipsnap homolog 1 (C. elegans)
Symbol
nipsnap1 Nomenclature History
Previous Names
  • zgc:153339
Type
protein_coding_gene
Location
Chr: 5 Mapping Details/Browsers
Description
Predicted to enable protein-macromolecule adaptor activity. Involved in mitophagy. Predicted to be active in mitochondrial matrix. Is expressed in several structures, including endoderm; heart; liver; pectoral fin; and pleuroperitoneal region. Used to study Parkinson's disease. Orthologous to human NIPSNAP1 (nipsnap homolog 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
2 figures from Princely Abudu et al., 2019
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
1 Figure from Princely Abudu et al., 2019
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
1 - 4 of 4
Show
Sequence Targeting Reagents
1 - 3 of 3
Show
Human Disease
Associated With nipsnap1 Human Ortholog
No data available
Associated With nipsnap1 Via Experimental Models
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR012577 NIPSNAP
Family IPR051557 NipSnap domain-containing protein
Homologous_superfamily IPR011008 Dimeric alpha-beta barrel
1 - 3 of 3
Domain Details Per Protein
Protein Length Dimeric alpha-beta barrel NIPSNAP NipSnap domain-containing protein
UniProtKB:F6NVH9 279
1 - 1 of 1
Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 5
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA nipsnap1-201 (1) Ensembl 1,472 nt
1 - 1 of 1
Interactions and Pathways
No data available
Antibodies
Name Type Antigen Genes Isotype Host Organism Assay Source Citations
Ab1-nipsnap1 polyclonal IgG Rabbit
  • WB
Abcam plc
2
1 - 1 of 1
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACDKEY-60F6ZFIN Curated Data
EncodescDNAMGC:153339ZFIN Curated Data
1 - 2 of 2
Show
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanNIPSNAP122
Phylogenetic tree (1)
Amino acid sequence comparison (2)
Conserved genome location (synteny) (1)
MouseNipsnap111
Conserved genome location (synteny) (1)
Amino acid sequence comparison (1)
Citations
1 - 5 of 5
Show