Gene

ebf3b

ID
ZDB-GENE-131126-3
Name
EBF transcription factor 3b
Symbol
ebf3b Nomenclature History
Previous Names
  • si:ch211-207n2.6 (1)
Type
protein_coding_gene
Location
Chr: 17 Mapping Details/Browsers
Description
Predicted to have DNA-binding transcription activator activity, RNA polymerase II-specific. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to localize to nucleus. Orthologous to human EBF3 (EBF transcription factor 3).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With ebf3b Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
hypotonia, ataxia, and delayed development syndrome Alliance Hypotonia, ataxia, and delayed development syndrome 617330
Associated With ebf3b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR018350 Transcription factor COE, conserved site
Domain IPR002909 IPT domain
Domain IPR032200 Transcription factor COE, DNA-binding domain
Domain IPR032201 Transcription factor COE, helix-loop-helix domain
Domain IPR038006 Transcription factor COE, IPT domain
Family IPR003523 Transcription factor COE
Homologous_superfamily IPR013783 Immunoglobulin-like fold
Homologous_superfamily IPR014756 Immunoglobulin E-set
Homologous_superfamily IPR038173 Transcription factor COE, DNA-binding domain superfamily
Domain Details Per Protein
Protein Length Immunoglobulin E-set Immunoglobulin-like fold IPT domain Transcription factor COE Transcription factor COE, conserved site Transcription factor COE, DNA-binding domain Transcription factor COE, DNA-binding domain superfamily Transcription factor COE, helix-loop-helix domain Transcription factor COE, IPT domain
UniProtKB:A0A8M9Q6E5 388
UniProtKB:X1WBX6 514
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA ebf3b-201 (1) Ensembl 3,298 nt
mRNA ebf3b-202 (1) Ensembl 2,883 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations