Gene

ftr93

ID
ZDB-GENE-131126-26
Name
finTRIM family, member 93
Symbol
ftr93 Nomenclature History
Previous Names
  • si:ch1073-460d17.3
Type
protein_coding_gene
Location
Chr: 2 Mapping Details/Browsers
Description
Predicted to enable zinc ion binding activity. Predicted to act upstream of or within immune system process. Predicted to be located in cytoplasm.
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
sa6822Allele with one point mutationUnknownSplice SiteENU
sa18234Allele with one point mutationUnknownPremature StopENU
Zebrafish International Resource Center (ZIRC) (order this)
European Zebrafish Resource Center (EZRC) (order this)
1 - 2 of 2
Show
Sequence Targeting Reagents
No data available
Human Disease
Associated With ftr93 Human Ortholog
No data available
Associated With ftr93 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR017907 Zinc finger, RING-type, conserved site
Domain IPR000315 B-box-type zinc finger
Domain IPR001841 Zinc finger, RING-type
Domain IPR001870 B30.2/SPRY domain
Domain IPR003877 SPRY domain
1 - 5 of 10 Show all
Domain Details Per Protein
Protein Length B30.2/SPRY domain B30.2/SPRY domain superfamily B-box-type zinc finger Concanavalin A-like lectin/glucanase domain superfamily E3 ubiquitin-protein ligase TRIM/RNF SPRY-associated SPRY domain Zinc finger, RING/FYVE/PHD-type Zinc finger, RING-type Zinc finger, RING-type, conserved site
UniProtKB:E7FBJ9
InterPro
562
1 - 1 of 1
Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 2
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA ftr93-201 (1)
Ensembl
Ensembl 3,063 nt
ZFIN BLAST
1 - 1 of 1
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inFosmidCH1073-460D17ZFIN Curated Data
1 - 1 of 1
Show
Sequences
Type Accession # Sequence Length (nt/aa) Analysis
RNARefSeq:XM_005170763 (1)2315 nt
ZFIN BLASTNCBI BLASTEnsemblUCSC BLAT
GenomicGenBank:CU856140 (1)35054 nt
MegaBLASTEnsembl
PolypeptideUniProtKB:E7FBJ9 (1)562 aa
ZFIN BLASTSIB BLASTEnsembl Protein Blast
Orthology
Comparative Orthology
Alliance
No data available
Citations
TSV
1 - 2 of 2
Show
Your Input Welcome
We welcome your input and comments. Please use this form to recommend updates to the information in ZFIN. We appreciate as much detail as possible and references as appropriate. We will review your comments promptly.