Gene

atg2b

ID

ZDB-GENE-131121-626

Name

autophagy related 2B

Symbol

atg2b Nomenclature History

Previous Names

si:ch73-307j11.1

Type

protein_coding_gene

Location

Chr: 17 Mapping Details/Browsers

Description

Predicted to be involved in autophagosome assembly; autophagy of mitochondrion; and autophagy of nucleus. Predicted to localize to extrinsic component of membrane and phagophore assembly site. Orthologous to human ATG2B (autophagy related 2B).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Liu et al., 2022

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With atg2b Human Ortholog

No data available

Associated With atg2b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR026854	Vacuolar protein sorting-associated protein 13-like, N-terminal domain
Family	IPR026849	Autophagy-related protein 2

Domain Details Per Protein

Protein	Length	Autophagy-related protein 2	Vacuolar protein sorting-associated protein 13-like, N-terminal domain
UniProtKB:A0A8M1PUV7 InterPro	539

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	atg2b-201 (1) Ensembl	Ensembl		1,558 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations