Gene

frmd4ba

ID

ZDB-GENE-130412-1

Name

FERM domain containing 4Ba

Symbol

frmd4ba Nomenclature History

Previous Names

fb59f02
si:dkey-178o16.1
wu:fb59f02

Type

protein_coding_gene

Location

Chr: 6 Mapping Details/Browsers

Description

Predicted to have cytoskeletal protein binding activity. Predicted to localize to adherens junction and bicellular tight junction. Orthologous to human FRMD4B (FERM domain containing 4B).

Genome Resources

Note

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With frmd4ba Human Ortholog

No data available

Associated With frmd4ba Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR019747	FERM conserved site
Domain	IPR000299	FERM domain
Domain	IPR018979	FERM, N-terminal
Domain	IPR018980	FERM, C-terminal PH-like domain
Domain	IPR019748	FERM central domain
Domain	IPR019749	Band 4.1 domain
Domain	IPR021774	Cytohesin Ubiquitin Protein Inducing Domain
Domain	IPR041785	FRMD4A/B, FERM domain C-lobe
Family	IPR000798	Ezrin/radixin/moesin-like
Family	IPR047176	FERM domain-containing protein 4A/B
Homologous_superfamily	IPR011993	PH-like domain superfamily
Homologous_superfamily	IPR014352	FERM/acyl-CoA-binding protein superfamily
Homologous_superfamily	IPR029071	Ubiquitin-like domain superfamily
Homologous_superfamily	IPR035963	FERM superfamily, second domain

Domain Details Per Protein

Protein	Length	Band 4.1 domain	Cytohesin Ubiquitin Protein Inducing Domain	Ezrin/radixin/moesin-like	FERM/acyl-CoA-binding protein superfamily	FERM central domain	FERM conserved site	FERM, C-terminal PH-like domain	FERM domain	FERM domain-containing protein 4A/B	FERM, N-terminal	FERM superfamily, second domain	FRMD4A/B, FERM domain C-lobe	PH-like domain superfamily	Ubiquitin-like domain superfamily
UniProtKB:A0A8M9PN64 InterPro	974
UniProtKB:A0A8M9Q755 InterPro	1016
UniProtKB:A0A8M9PYT3 InterPro	1028
UniProtKB:A0A8M3BAK8 InterPro	1016
UniProtKB:A0A8M9P9D0 InterPro	974
UniProtKB:A0A8M9QGB7 InterPro	1001
UniProtKB:A0A8M9PN59 InterPro	1028
UniProtKB:A0A8M1RR05 InterPro	1001
UniProtKB:A0A8M9PKJ1 InterPro	680
UniProtKB:A0A8M9Q0V8 InterPro	680

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	frmd4ba-202 (1) Ensembl	Ensembl	4,516 nt	Select Tool
mRNA	frmd4ba-205 (1) Ensembl	Ensembl	912 nt	Select Tool
mRNA	frmd4ba-206 (1) Ensembl	Ensembl	6,515 nt	Select Tool ZFIN BLAST
mRNA	frmd4ba-207 (1) Ensembl	Ensembl	6,311 nt	Select Tool ZFIN BLAST
mRNA	frmd4ba-208 (1) Ensembl	Ensembl	159 nt	Select Tool ZFIN BLAST
ncRNA	frmd4ba-002 (1) Ensembl	Ensembl	909 nt	Select Tool
ncRNA	frmd4ba-004 (1) Ensembl	Ensembl	218 nt	Select Tool
ncRNA	frmd4ba-005 (1) Ensembl	Ensembl	418 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations