Gene

pecam1b

ID

ZDB-GENE-120215-145

Name

platelet and endothelial cell adhesion molecule 1b

Symbol

pecam1b Nomenclature History

Previous Names

si:dkey-237i9.8

Type

protein_coding_gene

Location

Chr: 6 Mapping Details/Browsers

Description

Predicted to localize to integral component of membrane. Human ortholog(s) of this gene implicated in coronary artery disease; coronary stenosis; myocardial infarction; neuroblastoma; and psoriatic arthritis. Orthologous to human PECAM1 (platelet and endothelial cell adhesion molecule 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With pecam1b Human Ortholog

No data available

Associated With pecam1b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR003598	Immunoglobulin subtype 2
Domain	IPR003599	Immunoglobulin domain subtype
Domain	IPR007110	Immunoglobulin-like domain
Domain	IPR040878	IL-40-like, Ig domain
Family	IPR050488	Immunoglobulin Fc region receptor
Homologous_superfamily	IPR013783	Immunoglobulin-like fold
Homologous_superfamily	IPR036179	Immunoglobulin-like domain superfamily

Domain Details Per Protein

Protein	Length	IL-40-like, Ig domain	Immunoglobulin domain subtype	Immunoglobulin Fc region receptor	Immunoglobulin-like domain	Immunoglobulin-like domain superfamily	Immunoglobulin-like fold	Immunoglobulin subtype 2
UniProtKB:A0A8M9PMN8 InterPro	716
UniProtKB:A0A8M2BDP7 InterPro	750
UniProtKB:A0A8M6Z174 InterPro	744
UniProtKB:A0A8M9Q6P1 InterPro	782

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	si:dkey-237i9.8-201 (1) Ensembl	Ensembl	2,118 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-237i9.8-203 (1) Ensembl	Ensembl	2,078 nt	Select Tool ZFIN BLAST
ncRNA	si:dkey-237i9.8-002 (1) Ensembl	Ensembl	410 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance

Citations