Gene
rbfox3a
- ID
- ZDB-GENE-111213-1
- Name
- RNA binding fox-1 homolog 3a
- Symbol
- rbfox3a Nomenclature History
- Previous Names
-
- rbfox3
- neun (1)
- Type
- protein_coding_gene
- Location
- Chr: 12 Mapping Details/Browsers
- Description
- Predicted to have mRNA binding activity. Predicted to be involved in nervous system development and regulation of alternative mRNA splicing, via spliceosome. Localizes to nucleus. Is expressed in brain; heart; and spinal cord. Orthologous to human RBFOX3 (RNA binding fox-1 homolog 3).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 5 figures from 5 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Type | InterPro ID | Name |
---|---|---|
Domain | IPR000504 | RNA recognition motif domain |
Domain | IPR025670 | Fox-1 C-terminal domain |
Domain | IPR034237 | FOX1, RNA recognition motif |
Family | IPR017325 | RNA binding protein fox-1 homolog 1-3 |
Family | IPR047131 | RNA binding protein fox-1 homolog 1-like |
Homologous_superfamily | IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
Homologous_superfamily | IPR035979 | RNA-binding domain superfamily |
Domain Details Per Protein
Protein | Length | Fox-1 C-terminal domain | FOX1, RNA recognition motif | Nucleotide-binding alpha-beta plait domain superfamily | RNA-binding domain superfamily | RNA binding protein fox-1 homolog 1-3 | RNA binding protein fox-1 homolog 1-like | RNA recognition motif domain |
---|---|---|---|---|---|---|---|---|
UniProtKB:A0A8M9QES8
|
411 | |||||||
UniProtKB:A0A8M9QET1
|
345 | |||||||
UniProtKB:A0A8M9PX73
|
381 | |||||||
UniProtKB:A0A8M9QN15
|
387 | |||||||
UniProtKB:A0A8M9Q953
|
345 | |||||||
UniProtKB:A0A8M9Q950
|
415 | |||||||
UniProtKB:A0A8M9PX69
|
428 | |||||||
UniProtKB:A0A8M9QJ91
|
429 |
Type | Name | Annotation Method | Length (nt) | Analysis |
---|---|---|---|---|
mRNA |
rbfox3a-201
(1)
|
Ensembl | 1104 nt | |
mRNA |
rbfox3a-202
(1)
|
Havana | 7208 nt | |
mRNA |
rbfox3a-203
(1)
|
Ensembl | 1589 nt |
Interactions and Pathways
No data available
Plasmids
No data available