Gene
trim107
- ID
- ZDB-GENE-110919-5
- Name
- tripartite motif containing 107
- Symbol
- trim107 Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 6 Mapping Details/Browsers
- Description
- Predicted to have metal ion binding activity. Human ortholog(s) of this gene implicated in Henoch-Schoenlein purpura; asthma; familial Mediterranean fever; hematologic cancer (multiple); and lung disease. Orthologous to several human genes including MEFV (MEFV innate immuity regulator, pyrin); TRIM6-TRIM34 (TRIM6-TRIM34 readthrough); and RNF39 (ring finger protein 39).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR017907 | Zinc finger, RING-type, conserved site |
| Domain | IPR001841 | Zinc finger, RING-type |
| Domain | IPR001870 | B30.2/SPRY domain |
| Domain | IPR003879 | Butyrophylin-like, SPRY domain |
| Domain | IPR006574 | SPRY-associated |
| Family | IPR051051 | E3 ubiquitin-protein ligase TRIM/RNF |
| Homologous_superfamily | IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| Homologous_superfamily | IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily |
| Homologous_superfamily | IPR043136 | B30.2/SPRY domain superfamily |
Domain Details Per Protein
| Protein | Length | B30.2/SPRY domain | B30.2/SPRY domain superfamily | Butyrophylin-like, SPRY domain | Concanavalin A-like lectin/glucanase domain superfamily | E3 ubiquitin-protein ligase TRIM/RNF | SPRY-associated | Zinc finger, RING/FYVE/PHD-type | Zinc finger, RING-type | Zinc finger, RING-type, conserved site |
|---|---|---|---|---|---|---|---|---|---|---|
|
UniProtKB:F1R358
|
469 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
trim107-201
(1)
|
Ensembl | 1,492 nt | ||
| mRNA |
trim107-202
(1)
|
Ensembl | 605 nt | ||
| mRNA |
trim107-203
(1)
|
Ensembl | 5,021 nt |
Interactions and Pathways
No data available
Plasmids
No data available