Gene

pipox

ID
ZDB-GENE-110627-2
Name
pipecolic acid oxidase
Symbol
pipox Nomenclature History
Previous Names
None
Type
protein_coding_gene
Location
Chr: 15 Mapping Details/Browsers
Description
Predicted to enable L-pipecolate oxidase activity and sarcosine oxidase activity. Predicted to be involved in L-lysine catabolic process to acetyl-CoA via L-pipecolate. Predicted to be active in peroxisome. Orthologous to human PIPOX (pipecolic acid and sarcosine oxidase).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
sa13980Allele with one point mutationUnknownSplice SiteENU
European Zebrafish Resource Center (EZRC) (order this)
Zebrafish International Resource Center (ZIRC) (order this)
sa22647Allele with one point mutationUnknownSplice SiteENU
Zebrafish International Resource Center (ZIRC) (order this)
European Zebrafish Resource Center (EZRC) (order this)
sa39043Allele with one point mutationUnknownPremature StopENU
European Zebrafish Resource Center (EZRC) (order this)
Zebrafish International Resource Center (ZIRC) (order this)
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Sequence Targeting Reagents
No data available
Human Disease
Associated With pipox Human Ortholog
No data available
Associated With pipox Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR006076 FAD dependent oxidoreductase
Family IPR045170 MTOX family
Homologous_superfamily IPR036188 FAD/NAD(P)-binding domain superfamily
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Domain Details Per Protein
Protein Length FAD dependent oxidoreductase FAD/NAD(P)-binding domain superfamily MTOX family
UniProtKB:Q1JQ42
InterPro
405
UniProtKB:A0A8M1P8J4
InterPro
387
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Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 15
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA pipox-201 (1)
Ensembl
Ensembl 1,963 nt
ZFIN BLAST
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Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACDKEY-103P9ZFIN Curated Data
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Sequences
Type Accession # Sequence Length (nt/aa) Analysis
RNARefSeq:NM_001326390 (1)1989 nt
ZFIN BLASTNCBI BLASTEnsemblUCSC BLAT
GenomicGenBank:CU313324 (1)106843 nt
MegaBLASTEnsembl
PolypeptideUniProtKB:Q1JQ42 (1)405 aa
ZFIN BLASTSIB BLASTEnsembl Protein Blast
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanPIPOX17
Conserved genome location (synteny) (2)
Amino acid sequence comparison (1)
MousePipox11
Amino acid sequence comparison (1)
Conserved genome location (synteny) (1)
Citations
TSV
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