Gene
rbm27
- ID
- ZDB-GENE-110411-31
- Name
- RNA binding motif protein 27
- Symbol
- rbm27 Nomenclature History
- Previous Names
-
- si:dkey-149g3.2
- Type
- protein_coding_gene
- Location
- Chr: 9 Mapping Details/Browsers
- Description
- Predicted to enable RNA binding activity. Predicted to be active in nucleus. Orthologous to human RBM27 (RNA binding motif protein 27).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
| Allele | Type | Localization | Consequence | Mutagen | Supplier |
|---|---|---|---|---|---|
| sa31753 | Allele with one point mutation | Unknown | Premature Stop | ENU |
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No data available
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000504 | RNA recognition motif domain |
| Domain | IPR000571 | Zinc finger, CCCH-type |
| Domain | IPR002483 | PWI domain |
| Family | IPR045137 | RNA-binding protein 26/27 |
| Homologous_superfamily | IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| Homologous_superfamily | IPR035979 | RNA-binding domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Nucleotide-binding alpha-beta plait domain superfamily | PWI domain | RNA-binding domain superfamily | RNA-binding protein 26/27 | RNA recognition motif domain | Zinc finger, CCCH-type |
|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M2BFD3 | InterPro | 972 | ||||||
| UniProtKB:F8W2E8 | InterPro | 1031 | ||||||
| UniProtKB:A0A8M2BG07 | InterPro | 1030 | ||||||
| UniProtKB:A0AB32TXW8 | InterPro | 971 |
Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | BAC | DKEY-149G3 | ZFIN Curated Data |
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| Type | Accession # | Sequence | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:XM_068223695 (1) | 5732 nt | ||
| Genomic | GenBank:CU468941 (1) | 64865 nt | ||
| Polypeptide | UniProtKB:F8W2E8 (1) | 1031 aa |