Gene

nptx2b

ID
ZDB-GENE-110328-1
Name
neuronal pentraxin IIb
Symbol
nptx2b Nomenclature History
Previous Names
None
Type
protein_coding_gene
Location
Chr: 12 Mapping Details/Browsers
Description
Involved in regulation of circadian rhythm and regulation of neuronal synaptic plasticity. Is expressed in cranial ganglion; habenula; hypothalamus; pineal complex; and retina. Orthologous to human NPTX2 (neuronal pentraxin 2).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
3 figures from Appelbaum et al., 2010
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With nptx2b Human Ortholog
No data available
Associated With nptx2b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR030476 Pentaxin, conserved site
Family IPR001759 Pentraxin-related
Homologous_superfamily IPR013320 Concanavalin A-like lectin/glucanase domain superfamily
Domain Details Per Protein
Protein Length Concanavalin A-like lectin/glucanase domain superfamily Pentaxin, conserved site Pentraxin-related
UniProtKB:D2D0C0 426
Transcripts
Genome Browsers
Type Name Annotation Method Length (nt) Analysis
mRNA nptx2b-201 (1) Havana 1281 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations