Gene
micall1a
- ID
- ZDB-GENE-110119-1
- Name
- MICAL-like 1a
- Symbol
- micall1a Nomenclature History
- Previous Names
-
- micall1
- wu:fb81a07
- Type
- protein_coding_gene
- Location
- Chr: 6 Mapping Details/Browsers
- Description
- Predicted to enable metal ion binding activity. Is expressed in several structures, including integument; pectoral fin; pronephric duct; thyroid follicle; and yolk syncytial layer. Orthologous to human MICALL1 (MICAL like 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Xue et al., 2010
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
| Allele | Type | Localization | Consequence | Mutagen | Supplier |
|---|---|---|---|---|---|
| sa10835 | Allele with one point mutation | Unknown | Premature Stop | ENU |
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No data available
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Length | bMERB domain | Calponin homology domain | CH domain superfamily | F-actin Monooxygenase Mical | Zinc finger, LIM-type |
|---|---|---|---|---|---|---|
|
UniProtKB:A0A8M3B0D6
|
853 | |||||
|
UniProtKB:E7FA45
|
867 |
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| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
micall1a-201
(1)
|
Ensembl | 3,354 nt | ||
| mRNA |
micall1a-202
(1)
|
Ensembl | 3,273 nt |
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Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | BAC | CH211-152N14 | ZFIN Curated Data | |
| Contained in | BAC | DKEY-43K4 | ||
| Encodes | EST | fb81a07 |
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| Type | Accession # | Sequence | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:XM_001922140 (1) | 3459 nt | ||
| Genomic | GenBank:CR759902 (1) | 168289 nt | ||
| Polypeptide | UniProtKB:E7FA45 (1) | 867 aa |
- Elkon, R., Milon, B., Morrison, L., Shah, M., Vijayakumar, S., Racherla, M., Leitch, C.C., Silipino, L., Hadi, S., Weiss-Gayet, M., Barras, E., Schmid, C.D., Ait-Lounis, A., Barnes, A., Song, Y., Eisenman, D.J., Eliyahu, E., Frolenkov, G.I., Strome, S.E., Durand, B., Zaghloul, N.A., Jones, S.M., Reith, W., Hertzano, R. (2015) RFX transcription factors are essential for hearing in mice. Nature communications. 6:8549
- Xue, Y., Kuok, C., Xiao, A., Zhu, Z., Lin, S., and Zhang, B. (2010) Identification and expression analysis of mical family genes in zebrafish. Journal of genetics and genomics = Yi chuan xue bao. 37(10):685-693
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