Gene

ccdc88aa

ID

ZDB-GENE-100701-2

Name

coiled-coil domain containing 88Aa

Symbol

ccdc88aa Nomenclature History

Previous Names

None

Type

protein_coding_gene

Location

Chr: 6 Mapping Details/Browsers

Description

Predicted to have dynein light intermediate chain binding activity and microtubule binding activity. Predicted to be involved in cytoplasmic microtubule organization and cytoskeleton-dependent intracellular transport. Predicted to localize to centrosome and cytoplasm. Orthologous to human CCDC88A (coiled-coil domain containing 88A).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With ccdc88aa Human Ortholog

Disease Ontology Term	Multi-Species Data	OMIM Term	OMIM Phenotype ID
		?PEHO syndrome-like	617507

Associated With ccdc88aa Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001715	Calponin homology domain
Domain	IPR043936	HOOK, N-terminal
Homologous_superfamily	IPR036872	CH domain superfamily

Domain Details Per Protein

Protein	Length	Calponin homology domain	CH domain superfamily	HOOK, N-terminal
UniProtKB:A0A8M3B070 InterPro	1472
UniProtKB:A0A8M3BA59 InterPro	1554
UniProtKB:A0A8M9P931 InterPro	1553
UniProtKB:A0A8M9PK76 InterPro	1550
UniProtKB:A0A8M3AT37 InterPro	1550
UniProtKB:A0A8M6YYS9 InterPro	1526
UniProtKB:A0A8M9PR85 InterPro	1549
UniProtKB:A0A8M6Z6T3 InterPro	1468
UniProtKB:A0A8M9PYI0 InterPro	1472
UniProtKB:A0A8M9PYH7 InterPro	1554
UniProtKB:A0A8M9Q1V9 InterPro	1526
UniProtKB:A0A8M3B353 InterPro	1549

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	ccdc88aa-201 (1) Ensembl	Ensembl		4,649 nt	Select Tool
mRNA	ccdc88aa-202 (1) Ensembl	Ensembl		348 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance

Citations