Gene
rbfox3b
- ID
- ZDB-GENE-091204-46
- Name
- RNA binding fox-1 homolog 3b
- Symbol
- rbfox3b Nomenclature History
- Previous Names
-
- rbfox3l
- si:ch73-322f21.1 (1)
- Type
- protein_coding_gene
- Location
- Chr: 3 Mapping Details/Browsers
- Description
- Predicted to have mRNA binding activity. Predicted to be involved in nervous system development and regulation of alternative mRNA splicing, via spliceosome. Localizes to nucleus. Is expressed in brain and spinal cord. Orthologous to human RBFOX3 (RNA binding fox-1 homolog 3).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Type | InterPro ID | Name |
---|---|---|
Domain | IPR000504 | RNA recognition motif domain |
Domain | IPR025670 | Fox-1 C-terminal domain |
Domain | IPR034237 | FOX1, RNA recognition motif |
Family | IPR017325 | RNA binding protein fox-1 homolog 1-3 |
Family | IPR047131 | RNA binding protein fox-1 homolog 1-like |
Homologous_superfamily | IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
Homologous_superfamily | IPR035979 | RNA-binding domain superfamily |
Domain Details Per Protein
Protein | Length | Fox-1 C-terminal domain | FOX1, RNA recognition motif | Nucleotide-binding alpha-beta plait domain superfamily | RNA-binding domain superfamily | RNA binding protein fox-1 homolog 1-3 | RNA binding protein fox-1 homolog 1-like | RNA recognition motif domain |
---|---|---|---|---|---|---|---|---|
UniProtKB:A0A8M9PBK7
|
334 | |||||||
UniProtKB:A0A8M9PBK2
|
359 | |||||||
UniProtKB:A0A8M9PN39
|
356 | |||||||
UniProtKB:A0A8M9Q1D6
|
345 | |||||||
UniProtKB:A0A8M9PBL0
|
328 | |||||||
UniProtKB:A0A8M6YZ68
|
317 |
Type | Name | Annotation Method | Length (nt) | Analysis |
---|---|---|---|---|
mRNA |
rbfox3b-201
(1)
|
Ensembl | 912 nt | |
mRNA |
rbfox3b-202
(1)
|
Havana | 1254 nt | |
mRNA |
rbfox3b-204
(1)
|
Havana | 861 nt | |
mRNA |
rbfox3b-205
(1)
|
Ensembl | 1311 nt | |
mRNA |
rbfox3b-206
(1)
|
Ensembl | 819 nt | |
ncRNA |
rbfox3b-003
(1)
|
Havana | 425 nt |
Interactions and Pathways
No data available
Plasmids
No data available