Gene

asb13b

ID

ZDB-GENE-091118-116

Name

ankyrin repeat and SOCS box containing 13b

Symbol

asb13b Nomenclature History

Previous Names

sb:eu973
si:ch73-77l8.1

Type

protein_coding_gene

Location

Chr: 8 Mapping Details/Browsers

Description

Predicted to be involved in protein ubiquitination. Predicted to act upstream of or within intracellular signal transduction. Is expressed in female organism. Orthologous to human ASB13 (ankyrin repeat and SOCS box containing 13).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

2 figures from 2 publications

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

eu973 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With asb13b Human Ortholog

No data available

Associated With asb13b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001496	SOCS box domain
Domain	IPR037334	Ankyrin repeat and SOCS box protein 13, SOCS box domain
Family	IPR051573	Ankyrin repeat and SOCS box domain-containing protein
Homologous_superfamily	IPR036036	SOCS box-like domain superfamily
Homologous_superfamily	IPR036770	Ankyrin repeat-containing domain superfamily
Repeat	IPR002110	Ankyrin repeat

Domain Details Per Protein

Protein	Length	Ankyrin repeat	Ankyrin repeat and SOCS box domain-containing protein	Ankyrin repeat and SOCS box protein 13, SOCS box domain	Ankyrin repeat-containing domain superfamily	SOCS box domain	SOCS box-like domain superfamily
UniProtKB:E7FFH0 InterPro	294
UniProtKB:A0A8M2BE81 InterPro	249

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	asb13b-201 (1) Ensembl	Ensembl	1,409 nt	Select Tool ZFIN BLAST
mRNA	asb13b-202 (1) Ensembl	Ensembl	849 nt	Select Tool ZFIN BLAST
mRNA	asb13b-203 (1) Ensembl	Ensembl	849 nt	Select Tool ZFIN BLAST
mRNA	asb13b-204 (1) Ensembl	Ensembl	870 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations