Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-090918-1
Gene Name: neuroligin 1
Gene Symbol: nlgn1
Nomenclature History
GENE EXPRESSION
All Expression Data: 8 figures from 3 publications
Wild-type Stages, Structures: Cleavage:2-cell (0.75h-1.0h) to Adult (90d-730d, breeding adult)
  brain, caudal vein plexus, corpus mamillare, cranial ganglion (all 33) expand
Curated Microarray Expression: GEO (1)
MUTANTS AND TARGETED KNOCKDOWNS
Mutant lines: 4 genotypes
Alleles: fh309, fh310, nlgn1_unrecovered
Knockdown reagents: MO1-nlgn1 (1)
PHENOTYPE No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process sprouting angiogenesis (more)
Cellular Component membrane (more)
GO Terms (all 3)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000460 (1)
  • InterPro:IPR002018 (1)
  • InterPro:IPR019819 (1)
  • PROSITE:PS00941 (1)
  • Pfam:PF00135 (1)
  • TRANSCRIPTS No data available
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    CONSTRUCTS WITH SEQUENCES FROM nlgn1 No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS No data available
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001142265 (1) 2544 bp
    Genomic GenBank:BX005472 (1) 158170 bp
    Select Tool
    Polypeptide UniProtKB:D2X2F9 (1) 867 aa
    Sequence Clusters UniGene:86013 (1)
    Sequence Information (all 30)
    OTHER nlgn1 GENE PAGES
  • Gene:100002610 (1)
  • Ensembl(Zv9):ENSDARG00000077710 (1)
  • MAPPING INFORMATION Unknown
    ORTHOLOGY
      Evidence
    Species Symbol Chromosome (Position) Accession # AA CL
    Zebrafish nlgn1  
    Human NLGN1 3 (3q26.31)
  • OMIM:600568
  • Gene:22871
  • Mouse Nlgn1 3 ( 10.38 cM)
  • MGI:2179435
  • Gene:192167
  • CITATIONS (15)