Gene

snx8b

ID

ZDB-GENE-090313-317

Name

sorting nexin 8b

Symbol

snx8b Nomenclature History

Previous Names

si:dkey-58j15.9

Type

protein_coding_gene

Location

Chr: 1 Mapping Details/Browsers

Description

Predicted to have phosphatidylinositol binding activity. Predicted to be involved in retrograde transport, endosome to Golgi. Orthologous to human SNX8 (sorting nexin 8).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With snx8b Human Ortholog

No data available

Associated With snx8b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001683	Phox homology
Domain	IPR035704	SNX8/Mvp1, PX domain
Family	IPR028662	Sorting nexin-8/Mvp1
Homologous_superfamily	IPR036871	PX domain superfamily

Domain Details Per Protein

Protein	Length	Phox homology	PX domain superfamily	SNX8/Mvp1, PX domain	Sorting nexin-8/Mvp1
UniProtKB:A0A8M9PX28 InterPro	417
UniProtKB:A0A0R4IDN5 InterPro	418

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	snx8b-201 (1) Ensembl	Ensembl		2,233 nt	Select Tool ZFIN BLAST
mRNA	snx8b-202 (1) Ensembl	Ensembl		1,060 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations