ZFIN Gene: atrn

ZFIN ID: ZDB-GENE-090312-21

ZFIN ID: ZDB-GENE-090312-21

GENE EXPRESSION No data available

MUTANTS AND TARGETED KNOCKDOWNS No data available

PHENOTYPE No data available

GENE ONTOLOGY

Ontology	GO Term
Cellular Component	integral to membrane (more)
Molecular Function	carbohydrate binding (more)

GO Terms (all 4)

PROTEIN FAMILIES, DOMAINS AND SITES
InterPro:IPR000742 (1) InterPro:IPR000859 (1) InterPro:IPR001304 (1) InterPro:IPR002049 (1) InterPro:IPR002165 (1) InterPro:IPR003438 (1) InterPro:IPR003659 (1) InterPro:IPR006210 (1) InterPro:IPR013032 (1) InterPro:IPR015915 (1) InterPro:IPR016017 (1) InterPro:IPR016186 (1) InterPro:IPR016187 (1)	PROSITE:PS00022 (1) PROSITE:PS01180 (1) PROSITE:PS01186 (1) PROSITE:PS01248 (1) PROSITE:PS50026 (1) PROSITE:PS50027 (1) PROSITE:PS50041 (1)	Pfam:PF00431 (1) Pfam:PF01437 (1) Pfam:PF02351 (1)

TRANSCRIPTS
Type	Name	Length (bp)	Analysis
mRNA	atrn-001 (1)	4973	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT Vega

GENE PRODUCT DESCRIPTION No description available

ANTIBODIES No data available

CONSTRUCTS WITH SEQUENCES FROM atrn No data available

SEGMENT (CLONE AND PROBE) RELATIONSHIPS

atrn Contained in:

[BAC] CH73-41L5 (1) (order this), DKEY-12J14 (1) (order this), DKEY-259N11 (1) (order this)

SEQUENCE INFORMATION

Type	Accession #	Length (bp/aa)	Analysis
RNA	RefSeq:NM_001145615 (1)	4038 bp	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT Vega
Genomic	GenBank:CR388098 (1)	192818 bp	Select Tool MegaBLAST Ensembl
Polypeptide	UniProtKB:B8JI13 (1)	1345 aa	Select Tool ZFIN BLAST Ensembl SIB BLAST
Sequence Clusters	UniGene:81745 (1)

OTHER atrn GENE PAGES

Gene:794975 (1)

VEGA:OTTDARG00000029729 (1)

Ensembl(Zv9):ENSDARG00000062164 (1)

MAPPING INFORMATION
Chr: 13 Details

ORTHOLOGY

CITATIONS (7)