Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-090312-170
Gene Name: sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2
Gene Symbol: spock2
Previous Names: im:7149140, si:dkeyp-115d2.5
Location: Chr: 13   Details
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 7 figures (12 images) from Thisse et al., 2004 [IMAGE:7149140]
Wild-type Stages, Structures: Pharyngula:Prim-15 (30.0h-36.0h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
  brain, peripheral olfactory organ
MUTANTS AND TARGETED KNOCKDOWNS
Alleles: la011213Tg, sa22325
PHENOTYPE No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process signal transduction (more)
Cellular Component proteinaceous extracellular matrix (more)
Molecular Function calcium ion binding (more)
GO Terms (all 3)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000716 (1)
  • InterPro:IPR002350 (1)
  • InterPro:IPR011992 (1)
  • InterPro:IPR019577 (1)
  • PROSITE:PS00484 (1)
  • PROSITE:PS51162 (1)
  • PROSITE:PS51465 (1)
  • Pfam:PF00086 (1)
  • Pfam:PF07648 (1)
  • Pfam:PF10591 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA spock2-001 (1) 1704
    spock2-002 (1) 276
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    CONSTRUCTS WITH SEQUENCES FROM spock2 No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    spock2 Contained in: [BAC] CH211-26A17 (1) (order this), DKEYP-115D2 (1)
    spock2 Encodes: [EST] IMAGE:7149140 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_002664184 (1) 3661 bp
    Genomic GenBank:AL929344 (1) 190898 bp
    Select Tool
    Polypeptide UniProtKB:F1RE70 (1) 419 aa
    Sequence Clusters UniGene:81183 (1)
    Sequence Information (all 23)
    OTHER spock2 GENE PAGES
  • Gene:100320541 (1)
  • VEGA:OTTDARG00000029760 (1)
  • Ensembl(Zv9):ENSDARG00000075393 (1)
  • ORTHOLOGY
      Evidence
    Species Symbol Chr (Position) Accession # AA CL
    Zebrafish spock2 13  
    Human SPOCK2 10 (10pter-q25.3)
  • OMIM:607988
  • Gene:9806
  • Mouse Spock2 10 ( 29.69 cM)
  • MGI:1891351
  • Gene:94214
  • Orthology Details
    CITATIONS (14)