Gene

srbd1

ID
ZDB-GENE-081107-19
Name
S1 RNA binding domain 1
Symbol
srbd1 Nomenclature History
Previous Names
  • si:ch211-117n7.8
  • si:ch211-219o4.1
Type
protein_coding_gene
Location
Chr: 13 Mapping Details/Browsers
Description
Predicted to have mRNA binding activity. Predicted to be involved in translation. Orthologous to human SRBD1 (S1 RNA binding domain 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With srbd1 Human Ortholog
No data available
Associated With srbd1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR003029 S1 domain
Domain IPR006641 YqgF/RNase H-like domain
Domain IPR018974 Tex-like protein, N-terminal
Domain IPR032639 Tex protein, YqgF-like domain
Domain IPR041692 HHH domain 9
Domain IPR044146 Tex, S1 domain
Homologous_superfamily IPR010994 RuvA domain 2-like
Homologous_superfamily IPR012337 Ribonuclease H-like superfamily
Homologous_superfamily IPR012340 Nucleic acid-binding, OB-fold
Homologous_superfamily IPR023319 Tex-like protein, HTH domain superfamily
Homologous_superfamily IPR023323 Tex-like domain superfamily
Homologous_superfamily IPR037027 YqgF/RNase H-like domain superfamily
Domain Details Per Protein
Protein Length HHH domain 9 Nucleic acid-binding, OB-fold Ribonuclease H-like superfamily RuvA domain 2-like S1 domain Tex-like domain superfamily Tex-like protein, HTH domain superfamily Tex-like protein, N-terminal Tex protein, YqgF-like domain Tex, S1 domain YqgF/RNase H-like domain YqgF/RNase H-like domain superfamily
UniProtKB:A0A8M9Q4Z5 441
UniProtKB:A0A8M9QFT1 982
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA srbd1-201 (1) Ensembl 2,149 nt
mRNA srbd1-203 (1) Ensembl 774 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations