Gene
lrrc38a
- ID
- ZDB-GENE-080327-12
- Name
- leucine rich repeat containing 38a
- Symbol
- lrrc38a Nomenclature History
- Previous Names
-
- lrrc38
- sc:d0332 (1)
- si:ch211-145d10.6
- Type
- protein_coding_gene
- Location
- Chr: 23 Mapping Details/Browsers
- Description
- Predicted to have ion channel binding activity; potassium channel activator activity; and voltage-gated potassium channel activity. Predicted to localize to voltage-gated potassium channel complex. Is expressed in diencephalon; habenula; hypothalamus; and retinal inner nuclear layer. Orthologous to human LRRC38 (leucine rich repeat containing 38).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 7 figures from Thisse et al., 2008
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- cssl:d0332 (12 images)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000372 | Leucine-rich repeat N-terminal domain |
| Domain | IPR000483 | Cysteine-rich flanking region, C-terminal |
| Family | IPR051432 | Voltage and calcium-activated potassium channel auxiliary protein |
| Homologous_superfamily | IPR032675 | Leucine-rich repeat domain superfamily |
| Repeat | IPR001611 | Leucine-rich repeat |
| Repeat | IPR003591 | Leucine-rich repeat, typical subtype |
Domain Details Per Protein
| Protein | Length | Cysteine-rich flanking region, C-terminal | Leucine-rich repeat | Leucine-rich repeat domain superfamily | Leucine-rich repeat N-terminal domain | Leucine-rich repeat, typical subtype | Voltage and calcium-activated potassium channel auxiliary protein |
|---|---|---|---|---|---|---|---|
|
UniProtKB:A0A2R8QU37
|
290 | ||||||
|
UniProtKB:F1Q7W4
|
290 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
lrrc38a-201
(1)
|
Ensembl | 1,143 nt |
Interactions and Pathways
No data available
Plasmids
No data available