Gene

csrnp1a

ID

ZDB-GENE-070912-475

Name

cysteine-serine-rich nuclear protein 1a

Symbol

csrnp1a Nomenclature History

Previous Names

axud1
csrnp1
DrAxud1-like (1)
si:dkey-24c2.8 (1)

Type

protein_coding_gene

Location

Chr: 2 Mapping Details/Browsers

Description

Involved in primitive hemopoiesis. Is expressed in intermediate cell mass of mesoderm. Orthologous to human CSRNP1 (cysteine and serine rich nuclear protein 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

2 figures from Espina et al., 2013

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: 4 figures from Espina et al., 2013
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With csrnp1a Human Ortholog

No data available

Associated With csrnp1a Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR031972	Cysteine/serine-rich nuclear protein, N-terminal domain
Family	IPR023260	Cysteine/serine-rich nuclear protein family

Domain Details Per Protein

Protein	Length	Cysteine/serine-rich nuclear protein family	Cysteine/serine-rich nuclear protein, N-terminal domain
UniProtKB:B0S776 InterPro	514

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	csrnp1a-201 (1) Ensembl	Havana	3138 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl
Note: Synteny was checked- found Axud1/Csrnp1, Gorasp1, Xirp1 neighbors on Mm Chr 9, and corresponding orthologues on zf Chr 2.

Citations