Gene

stag1a

ID
ZDB-GENE-070912-448
Name
STAG1 cohesin complex component a
Symbol
stag1a Nomenclature History
Previous Names
  • stag1
  • si:dkey-223d7.4 (1)
  • wu:fc28h03
Type
protein_coding_gene
Location
Chr: 2 Mapping Details/Browsers
Description
Predicted to have chromatin binding activity. Predicted to be involved in sister chromatid cohesion. Predicted to localize to chromatin; cohesin complex; and nucleus. Human ortholog(s) of this gene implicated in autosomal dominant mental retardation 47. Orthologous to human STAG1 (stromal antigen 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
3 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
la010827TgTransgenic insertionUnknownUnknownDNA
nz204Allele with one delinsExon 3UnknownCRISPR
sa12166Allele with one point mutationUnknownSplice SiteENU
sa13423Allele with one point mutationUnknownPremature StopENU
sa17076Allele with one point mutationUnknownPremature StopENU
sa19759Allele with one point mutationUnknownSplice SiteENU
sa25109Allele with one point mutationUnknownSplice SiteENU
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Sequence Targeting Reagents
Targeting Reagent Created Alleles Citations
CRISPR1-stag1a (2)
MO1-stag1aN/AKetharnathan et al., 2020
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Human Disease
Associated With stag1a Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
autosomal dominant intellectual developmental disorder 47 Alliance Intellectual developmental disorder, autosomal dominant 47 617635
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Associated With stag1a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
No data available
Domain Details Per Protein
No data available
Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 2
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA stag1a-201 (1) Ensembl 3,777 nt
mRNA stag1a-202 (1) Ensembl 7,677 nt
mRNA stag1a-203 (1) Ensembl 3,792 nt
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Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACDKEY-223D7ZFIN Curated Data
ContainsSNPrs3727630
    ZFIN Curated Data
    EncodesESTfc28h03
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    Sequences
    Orthology
    Comparative Orthology
    Alliance
    Gene Tree
    Ensembl
    Species Symbol Chromosome Accession # Evidence
    HumanSTAG13
    Conserved genome location (synteny) (2)
    Amino acid sequence comparison (2)
    MouseStag19
    Amino acid sequence comparison (1)
    Conserved genome location (synteny) (1)
    Citations
    1 - 7 of 7
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