Gene
sema5ba
- ID
- ZDB-GENE-070912-187
- Name
- sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5Ba
- Symbol
- sema5ba Nomenclature History
- Previous Names
-
- sema5b
- si:ch211-208i8.1
- Type
- protein_coding_gene
- Location
- Chr: 9 Mapping Details/Browsers
- Description
- Predicted to have semaphorin receptor binding activity. Involved in axonogenesis involved in innervation and sensory perception of touch. Predicted to localize to integral component of membrane. Orthologous to human SEMA5B (semaphorin 5B).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Type | InterPro ID | Name |
---|---|---|
Domain | IPR001627 | Sema domain |
Domain | IPR016201 | PSI domain |
Family | IPR027231 | Semaphorin |
Homologous_superfamily | IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
Homologous_superfamily | IPR036352 | Sema domain superfamily |
Homologous_superfamily | IPR036383 | Thrombospondin type-1 (TSP1) repeat superfamily |
Repeat | IPR000884 | Thrombospondin type-1 (TSP1) repeat |
Repeat | IPR002165 | Plexin repeat |
Domain Details Per Protein
Protein | Length | Plexin repeat | PSI domain | Sema domain | Sema domain superfamily | Semaphorin | Thrombospondin type-1 (TSP1) repeat | Thrombospondin type-1 (TSP1) repeat superfamily | WD40/YVTN repeat-like-containing domain superfamily |
---|---|---|---|---|---|---|---|---|---|
UniProtKB:A0A8M2BFB2
|
984 | ||||||||
UniProtKB:F1QPQ6
|
1101 |
Type | Name | Annotation Method | Length (nt) | Analysis |
---|---|---|---|---|
mRNA |
sema5ba-201
(1)
|
Ensembl | 3604 nt | |
mRNA |
sema5ba-202
(1)
|
Havana | 3116 nt | |
mRNA |
sema5ba-203
(1)
|
Ensembl | 3851 nt | |
mRNA |
sema5ba-204
(1)
|
Ensembl | 2991 nt | |
mRNA |
sema5ba-205
(1)
|
Ensembl | 3931 nt |
Interactions and Pathways
No data available
Plasmids
No data available