Gene

paplna

ID

ZDB-GENE-070815-4

Name

papilin a, proteoglycan-like sulfated glycoprotein

Symbol

paplna Nomenclature History

Previous Names

None

Type

protein_coding_gene

Location

Chr: 17 Mapping Details/Browsers

Description

Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to act upstream of or within extracellular matrix organization. Predicted to be located in extracellular region and plasma membrane. Orthologous to human PAPLN (papilin, proteoglycan like sulfated glycoprotein).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With paplna Human Ortholog

No data available

Associated With paplna Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR020901	Proteinase inhibitor I2, Kunitz, conserved site
Domain	IPR002223	Pancreatic trypsin inhibitor Kunitz domain
Domain	IPR003598	Immunoglobulin subtype 2
Domain	IPR003599	Immunoglobulin domain subtype
Domain	IPR007110	Immunoglobulin-like domain
Domain	IPR010294	ADAMTS/ADAMTS-like, Spacer 1
Domain	IPR010909	PLAC
Domain	IPR013098	Immunoglobulin I-set
Domain	IPR013106	Immunoglobulin V-set domain
Domain	IPR045371	ADAMTS/ADAMTS-like, cysteine-rich domain 3
Family	IPR013273	ADAMTS/ADAMTS-like
Family	IPR050439	ADAMTS and ADAMTS-like
Homologous_superfamily	IPR013783	Immunoglobulin-like fold
Homologous_superfamily	IPR036179	Immunoglobulin-like domain superfamily
Homologous_superfamily	IPR036383	Thrombospondin type-1 (TSP1) repeat superfamily
Homologous_superfamily	IPR036880	Pancreatic trypsin inhibitor Kunitz domain superfamily
Repeat	IPR000884	Thrombospondin type-1 (TSP1) repeat

Domain Details Per Protein

Protein	Length	ADAMTS/ADAMTS-like	ADAMTS/ADAMTS-like, cysteine-rich domain 3	ADAMTS/ADAMTS-like, Spacer 1	ADAMTS and ADAMTS-like	Immunoglobulin domain subtype	Immunoglobulin I-set	Immunoglobulin-like domain	Immunoglobulin-like domain superfamily	Immunoglobulin-like fold	Immunoglobulin subtype 2	Immunoglobulin V-set domain	Pancreatic trypsin inhibitor Kunitz domain	Pancreatic trypsin inhibitor Kunitz domain superfamily	PLAC	Proteinase inhibitor I2, Kunitz, conserved site	Thrombospondin type-1 (TSP1) repeat	Thrombospondin type-1 (TSP1) repeat superfamily
UniProtKB:A0A8M1QL06 InterPro	1163
UniProtKB:A0A8M9P9Q0 InterPro	719
UniProtKB:A0A8M9PLN8 InterPro	881
UniProtKB:A0A8M9P0S4 InterPro	1187
UniProtKB:A0A8M9P0S8 InterPro	826

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	paplna-201 (1) Ensembl	Ensembl	2,601 nt	Select Tool ZFIN BLAST
mRNA	paplna-202 (1) Ensembl	Ensembl	219 nt	Select Tool ZFIN BLAST
mRNA	paplna-203 (1) Ensembl	Ensembl	3,079 nt	Select Tool ZFIN BLAST
mRNA	paplna-204 (1) Ensembl	Ensembl	2,689 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations