Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-070607-1
Gene Name: caspase 3, apoptosis-related cysteine peptidase b
Gene Symbol: casp3b
Previous Names: casp3l, caspase-3b (1)
Location: Chr: 14   Details
Nomenclature History
GENE EXPRESSION
All Expression Data: Fig. 3 from López-Muñoz et al., 2009
MUTANTS AND TARGETED KNOCKDOWNS
Alleles: sa15886, sa22414
PHENOTYPE No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process apoptotic process (more)
Cellular Component cytoplasm (more)
Molecular Function cysteine-type endopeptidase activity (more)
GO Terms (all 9)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001309 (1)
  • InterPro:IPR002138 (1)
  • InterPro:IPR011600 (1)
  • InterPro:IPR015470 (1)
  • InterPro:IPR015917 (1)
  • InterPro:IPR016129 (1)
  • InterPro:IPR029030 (1)
  • PROSITE:PS01122 (1)
  • PROSITE:PS50207 (1)
  • PROSITE:PS50208 (1)
  • Pfam:PF00656 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA casp3b-001 (1) 1614
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM casp3b No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    casp3b Contained in: [BAC] CH73-225I24 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001048066 (1) 858 bp
    Genomic GenBank:CU638740 (1) 57008 bp
    Select Tool
    Polypeptide UniProtKB:F1Q7K7 (1) 285 aa
    Sequence Clusters UniGene:94264 (1)
    Sequence Information (all 14)
    OTHER casp3b GENE PAGES
  • Gene:566604 (1)
  • VEGA:OTTDARG00000034567 (1)
  • Ensembl(Zv9):ENSDARG00000055045 (1)
  • ORTHOLOGY
      Evidence
    Species Symbol Chr (Position) Accession # AA CL
    Zebrafish casp3b 14  
    Human CASP3 4 (4q34)
  • OMIM:600636
  • Gene:836
  • Mouse Casp3 8 ( 26.39 cM)
  • MGI:107739
  • Gene:12367
  • Orthology Details
    CITATIONS (16)