Gene
vps13c
- ID
- ZDB-GENE-070426-4
- Name
- vacuolar protein sorting 13 homolog C
- Symbol
- vps13c Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 7 Mapping Details/Browsers
- Description
- Human ortholog(s) of this gene implicated in Parkinson's disease 23. Orthologous to human VPS13C (vacuolar protein sorting 13 homolog C).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from O'Hare et al., 2016
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
---|---|---|---|
Parkinson's disease 23 | Alliance | Parkinson disease 23, autosomal recessive, early onset | 616840 |
Domain, Family, and Site Summary
Type | InterPro ID | Name |
---|---|---|
Domain | IPR009543 | Vacuolar protein sorting-associated protein 13, VPS13 adaptor binding domain |
Domain | IPR026854 | Vacuolar protein sorting-associated protein 13-like, N-terminal domain |
Domain | IPR031642 | VPS13, middle RBG modules |
Domain | IPR031645 | Vacuolar protein sorting-associated protein 13, DH-like domain |
Domain | IPR031646 | Vacuolar protein sorting-associated protein 13, extended chorein |
Domain | IPR049424 | Intermembrane lipid transfer protein VPS13, C-terminal |
Family | IPR026847 | Vacuolar protein sorting-associated protein 13 |
Domain Details Per Protein
Protein | Length | Intermembrane lipid transfer protein VPS13, C-terminal | Vacuolar protein sorting-associated protein 13 | Vacuolar protein sorting-associated protein 13, DH-like domain | Vacuolar protein sorting-associated protein 13, extended chorein | Vacuolar protein sorting-associated protein 13-like, N-terminal domain | Vacuolar protein sorting-associated protein 13, VPS13 adaptor binding domain | VPS13, middle RBG modules |
---|---|---|---|---|---|---|---|---|
UniProtKB:A0A8M9Q2G3
|
3695 | |||||||
UniProtKB:A0A8M9PZ34
|
3711 | |||||||
UniProtKB:A0A8M9Q2F4
|
3695 | |||||||
UniProtKB:A0A8M9QCR6
|
3623 | |||||||
UniProtKB:A0A8M9QHS1
|
3627 | |||||||
UniProtKB:A0A8M9PRV5
|
3739 | |||||||
UniProtKB:A0A8M9PPS2
|
3739 | |||||||
UniProtKB:A0A8M9QHR8
|
3754 | |||||||
UniProtKB:A0A8M9QCR2
|
3751 | |||||||
UniProtKB:A0A8M9Q8M3
|
3711 | |||||||
UniProtKB:A0A8M9PPR8
|
3750 | |||||||
UniProtKB:A0A8M9P9K9
|
3755 | |||||||
UniProtKB:A0A8M9Q2F8
|
3743 | |||||||
UniProtKB:A0A8M9Q8L8
|
3755 | |||||||
UniProtKB:A0A8M9PKS2
|
3751 | |||||||
UniProtKB:A0A8M9PRV0
|
3750 | |||||||
UniProtKB:A0A8M9P9L4
|
3627 | |||||||
UniProtKB:A0A8M9Q2E9
|
3743 | |||||||
UniProtKB:A0A8M9PKS9
|
3623 |
Type | Name | Annotation Method | Length (nt) | Analysis |
---|---|---|---|---|
mRNA |
vps13c-201
(1)
|
Havana | 13930 nt | |
ncRNA |
vps13c-003
(1)
|
Havana | 641 nt | |
ncRNA |
vps13c-005
(1)
|
Havana | 844 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Comparative Orthology
- Alliance