Gene

trappc12

ID

ZDB-GENE-070112-1282

Name

trafficking protein particle complex subunit 12

Symbol

trappc12 Nomenclature History

Previous Names

ttc15
zgc:158466

Type

protein_coding_gene

Location

Chr: 17 Mapping Details/Browsers

Description

Predicted to have endopeptidase activity. Orthologous to human TRAPPC12 (trafficking protein particle complex 12).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With trappc12 Human Ortholog

Disease Ontology Term	Multi-Species Data	OMIM Term	OMIM Phenotype ID
		Encephalopathy, progressive, early-onset, with brain atrophy and spasticity	617669

Associated With trappc12 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Homologous_superfamily	IPR011990	Tetratricopeptide-like helical domain superfamily
Repeat	IPR019734	Tetratricopeptide repeat

Domain Details Per Protein

Protein	Length	Tetratricopeptide-like helical domain superfamily	Tetratricopeptide repeat
UniProtKB:F1RE04 InterPro	760
UniProtKB:A0A8M2BH42 InterPro	758

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	trappc12-201 (1) Ensembl	Ensembl	3,193 nt	Select Tool ZFIN BLAST
mRNA	trappc12-202 (1) Ensembl	Ensembl	2,009 nt	Select Tool
mRNA	trappc12-203 (1) Ensembl	Ensembl	2,673 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations