Gene

ablim3

ID
ZDB-GENE-070112-1122
Name
actin binding LIM protein family, member 3
Symbol
ablim3 Nomenclature History
Previous Names
  • fb51g06
  • im:7152284
  • si:dkey-23o10.3
  • wu:fb51g06 (1)
  • zgc:158673
  • zgc:198293
Type
protein_coding_gene
Location
Chr: 14 Mapping Details/Browsers
Description
Predicted to have actin filament binding activity. Predicted to be involved in lamellipodium assembly. Predicted to localize to actin cytoskeleton. Is expressed in notochord and somite. Orthologous to human ABLIM3 (actin binding LIM protein family member 3).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
3 figures from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With ablim3 Human Ortholog
No data available
Associated With ablim3 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001781 Zinc finger, LIM-type
Domain IPR003128 Villin headpiece
Domain IPR032402 Putative adherens-junction anchoring domain
Family IPR051618 Actin-binding LIM
Homologous_superfamily IPR036886 Villin headpiece domain superfamily
Domain Details Per Protein
Protein Length Actin-binding LIM Putative adherens-junction anchoring domain Villin headpiece Villin headpiece domain superfamily Zinc finger, LIM-type
UniProtKB:A0A8M9QP71 588
UniProtKB:A0A8M9QGG2 638
UniProtKB:H0WEN9 632
UniProtKB:A1L269 683
UniProtKB:A0A8M9QB40 690
UniProtKB:B7ZVF6 631
UniProtKB:A0A0R4IXJ5 684
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA ablim3-202 (1) Ensembl 3,959 nt
mRNA ablim3-204 (1) Ensembl 865 nt
mRNA ablim3-205 (1) Ensembl 1,899 nt
mRNA ablim3-206 (1) Ensembl 2,055 nt
mRNA ablim3-207 (1) Ensembl 2,128 nt
ncRNA ablim3-002 (1) Ensembl 606 nt
ncRNA ottdart00000038856 (1) Ensembl 581 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations