Gene

nuggc.3

ID
ZDB-GENE-061207-67
Name
nuclear GTPase, germinal center associated, tandem duplicate 3
Symbol
nuggc.3 Nomenclature History
Previous Names
  • si:dkey-266f7.1 (1)
  • si:dkey-266f7.3
Type
protein_coding_gene
Location
Chr: 19 Mapping Details/Browsers
Description
Orthologous to human NUGGC (nuclear GTPase, germinal center associated).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
sa13249Allele with one point mutationUnknownPremature StopENU
European Zebrafish Resource Center (EZRC) (order this)
Zebrafish International Resource Center (ZIRC) (order this)
1 - 1 of 1
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Sequence Targeting Reagents
No data available
Human Disease
Associated With nuggc.3 Human Ortholog
No data available
Associated With nuggc.3 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR045063 Dynamin, N-terminal
Family IPR053082 Nuclear GTPase SLIP-GC
Homologous_superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase
1 - 3 of 3
Domain Details Per Protein
Protein Length Dynamin, N-terminal Nuclear GTPase SLIP-GC P-loop containing nucleoside triphosphate hydrolase
UniProtKB:F1QZV6
InterPro
429
UniProtKB:F6P8C7
InterPro
844
1 - 2 of 2
Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 19
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA nuggc.3-201 (1)
Ensembl
Ensembl 2,062 nt
ZFIN BLAST
mRNA nuggc.3-202 (1)
Ensembl
Ensembl 3,477 nt
ZFIN BLAST
ncRNA si:dkey-266f7.1-002 (1)
Ensembl
Ensembl 802 nt
ZFIN BLAST
ncRNA si:dkey-266f7.1-003 (1)
Ensembl
Ensembl 807 nt
ZFIN BLAST
ncRNA si:dkey-266f7.1-004 (1)
Ensembl
Ensembl 804 nt
ZFIN BLAST
1 - 5 of 5
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACDKEY-266F7ZFIN Curated Data
Contained inBACDKEYP-85E10ZFIN Curated Data
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Sequences
Type Accession # Sequence Length (nt/aa) Analysis
RNARefSeq:NM_001100097 (1)
ZFIN BLASTNCBI BLASTMegaBLASTEnsemblUCSC BLAT
GenomicGenBank:CR936442 (1)244065 nt
MegaBLAST
PolypeptideUniProtKB:F6P8C7 (1)844 aa
ZFIN BLASTSIB BLASTEnsembl Protein Blast
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
No data available
Citations
TSV
1 - 1 of 1
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