Gene
tnrc6c2
- ID
- ZDB-GENE-061207-48
- Name
- trinucleotide repeat containing adaptor 6C2
- Symbol
- tnrc6c2 Nomenclature History
- Previous Names
-
- si:dkey-10p5.9
- Type
- protein_coding_gene
- Location
- Chr: 6 Mapping Details/Browsers
- Description
- Predicted to have RNA binding activity. Predicted to be involved in gene silencing by miRNA and positive regulation of nuclear-transcribed mRNA poly(A) tail shortening. Predicted to localize to P-body and nucleoplasm.
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000504 | RNA recognition motif domain |
| Domain | IPR015940 | Ubiquitin-associated domain |
| Domain | IPR019486 | Argonaute hook domain |
| Domain | IPR026805 | GW182, middle domain |
| Domain | IPR032226 | TNRC6, PABC binding domain |
| Domain | IPR034927 | TNRC6C, RNA recognition motif |
| Domain | IPR041917 | Trinucleotide repeat-containing gene 6C protein, UBA domain |
| Family | IPR052068 | GW182 domain-containing protein |
| Homologous_superfamily | IPR009060 | UBA-like superfamily |
| Homologous_superfamily | IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| Homologous_superfamily | IPR035979 | RNA-binding domain superfamily |
Domain Details Per Protein
| Protein | Length | Argonaute hook domain | GW182 domain-containing protein | GW182, middle domain | Nucleotide-binding alpha-beta plait domain superfamily | RNA-binding domain superfamily | RNA recognition motif domain | TNRC6C, RNA recognition motif | TNRC6, PABC binding domain | Trinucleotide repeat-containing gene 6C protein, UBA domain | UBA-like superfamily | Ubiquitin-associated domain |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
UniProtKB:A0A8M3ATC8
|
1571 | |||||||||||
|
UniProtKB:A0A8M9PMP3
|
1534 | |||||||||||
|
UniProtKB:A0A8M6YYV7
|
1534 | |||||||||||
|
UniProtKB:A0A8M9Q4I3
|
1571 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
tnrc6c2-201
(1)
|
Ensembl | 9,286 nt | ||
| mRNA |
tnrc6c2-202
(1)
|
Ensembl | 5,484 nt |
Interactions and Pathways
No data available
Plasmids
No data available