Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-061110-88
Gene Name: ubiquitin C
Gene Symbol: ubc
Previous Names: im:7042025, wu:fb37h06, zgc:153686 (1)
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (0 images) from Rauch et al., 2003 [fb17g05]
  1 figure (1 image) from Thisse et al., 2004 [IMAGE:6898771]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
  unspecified, whole organism
Curated Microarray Expression: GEO (1)
MUTANTS AND TARGETED KNOCKDOWNS No data available
PHENOTYPE No data available
GENE ONTOLOGY
Ontology GO Term
Molecular Function molecular_function (more)
GO Terms (all 1)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000626 (1)
  • InterPro:IPR019954 (1)
  • InterPro:IPR019956 (1)
  • PROSITE:PS00299 (1)
  • PROSITE:PS50053 (1)
  • Pfam:PF00240 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ubc-001 (1) 1785
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    CONSTRUCTS WITH SEQUENCES FROM ubc No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    ubc Contained in: [BAC] CH211-226M13 (1) (order this)
    ubc Encodes: [EST] fb17g05 (1), fb37h06, IMAGE:6898771 (order this), IMAGE:7042025
    [cDNA] MGC:153686 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001077804 (1) 1835 bp
    Genomic GenBank:CU463283 (1) 121463 bp
    Select Tool
    Polypeptide UniProtKB:A0JPF1 (1) 533 aa
    Sequence Clusters UniGene:75568 (1)
    Sequence Information (all 29)
    OTHER ubc GENE PAGES
  • Gene:777766 (1)
  • VEGA:OTTDARG00000030831 (1)
  • Ensembl(Zv9):ENSDARG00000067755 (1)
  • MAPPING INFORMATION
    Chr: 10, 11 Details
    ORTHOLOGY
      Evidence
    Species Symbol Chromosome (Position) Accession # AA CL
    Zebrafish ubc 10, 11  
    Human UBC 12 (12q24.3)
  • OMIM:191340
  • Gene:7316
  • Mouse Ubc 5 ( 64.18 cM)
  • MGI:98889
  • Gene:22190
  • CITATIONS (13)