ZFIN ID: ZDB-GENE-061110-88
Gene Name: ubiquitin C
Gene Symbol: ubc
Previous Names: im:7042025, wu:fb37h06, zgc:153686 (1)
Location: Chr: 11   Details
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (0 images) from Rauch et al., 2003 [fb17g05]
  1 figure (1 image) from Thisse et al., 2004 [IMAGE:6898771]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
  unspecified, whole organism
Curated Microarray Expression: GEO (1)
MUTANTS AND TARGETED KNOCKDOWNS No data available
PHENOTYPE No data available
GENE ONTOLOGY
Ontology GO Term
Cellular Component cytoplasm (more)
Molecular Function molecular_function (more)
GO Terms (all 2)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000626 (1)
  • InterPro:IPR019954 (1)
  • InterPro:IPR019956 (1)
  • InterPro:IPR029071 (1)
  • PROSITE:PS00299 (1)
  • PROSITE:PS50053 (1)
  • Pfam:PF00240 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ubc-001 (1) 1785
    GENE PRODUCT DESCRIPTION No description available
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM ubc No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    ubc Contained in: [BAC] CH211-226M13 (1) (order this)
    ubc Encodes: [EST] fb17g05 (1), fb37h06, IMAGE:6898771 (order this), IMAGE:7042025
    [cDNA] MGC:153686 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001077804 (1) 1835 bp
    Genomic GenBank:CU463283 (1) 121463 bp
    Select Tool
    Polypeptide UniProtKB:A0JPF1 (1) 533 aa
    Sequence Clusters UniGene:75568 (1)
    Sequence Information (all 18)
    OTHER ubc GENE PAGES
  • Gene:777766 (1)
  • VEGA:OTTDARG00000030831 (1)
  • Ensembl(Zv9):ENSDARG00000067755 (1)
  • ORTHOLOGY
      Evidence
    Species Symbol Chr (Position) Accession # AA CL
    Zebrafish ubc 11  
    Human UBC 12 (12q24.3)
  • OMIM:191340
  • Gene:7316
  • Mouse Ubc 5 ( 64.18 cM)
  • MGI:98889
  • Gene:22190
  • Orthology Details
    CITATIONS (15)