Gene
rnf220a
- ID
- ZDB-GENE-060929-1006
- Name
- ring finger protein 220a
- Symbol
- rnf220a Nomenclature History
- Previous Names
-
- zgc:153254
- Type
- protein_coding_gene
- Location
- Chr: 2 Mapping Details/Browsers
- Description
- Predicted to have metal ion binding activity and ubiquitin-protein transferase activity. Orthologous to human RNF220 (ring finger protein 220).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 1 Figure from Ma et al., 2019
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
---|---|---|---|
hypomyelinating leukodystrophy 23 | Alliance | Leukodystrophy, hypomyelinating, 23, with ataxia, deafness, liver dysfunction, and dilated cardiomyopathy | 619688 |
Domain, Family, and Site Summary
Type | InterPro ID | Name |
---|---|---|
Domain | IPR001841 | Zinc finger, RING-type |
Domain | IPR031824 | E3 ubiquitin-protein ligase RNF220, middle domain |
Domain | IPR040178 | E3 ubiquitin-protein ligase RNF220, RING finger |
Family | IPR052443 | E3 ubiquitin-protein ligase RNF220-like |
Homologous_superfamily | IPR013083 | Zinc finger, RING/FYVE/PHD-type |
Domain Details Per Protein
Protein | Length | E3 ubiquitin-protein ligase RNF220-like | E3 ubiquitin-protein ligase RNF220, middle domain | E3 ubiquitin-protein ligase RNF220, RING finger | Zinc finger, RING/FYVE/PHD-type | Zinc finger, RING-type |
---|---|---|---|---|---|---|
UniProtKB:A0A8M9QNG6
|
669 | |||||
UniProtKB:A0A8M9PY31
|
333 | |||||
UniProtKB:A0A8M9Q9U5
|
634 | |||||
UniProtKB:A0A8M9PY03
|
638 | |||||
UniProtKB:A0A8M9QJR7
|
660 | |||||
UniProtKB:A0A8M9QJS5
|
399 | |||||
UniProtKB:A0A8M9QFI1
|
577 | |||||
UniProtKB:A0A8M9QFJ4
|
307 | |||||
UniProtKB:A0A8M9Q9V4
|
364 | |||||
UniProtKB:Q08CD0
|
307 | |||||
UniProtKB:A0A8M9PXZ7
|
695 | |||||
UniProtKB:A0A8M9QFH8
|
615 | |||||
UniProtKB:A0A8M9PY10
|
603 | |||||
UniProtKB:A0A8M9Q9V8
|
338 |
Type | Name | Annotation Method | Length (nt) | Analysis |
---|---|---|---|---|
aberrant processed transcript |
rnf220a-205
(1)
|
Havana | 855 nt | |
mRNA |
rnf220a-201
(1)
|
Havana | 1614 nt | |
mRNA |
rnf220a-202
(1)
|
Havana | 1734 nt | |
mRNA |
rnf220a-203
(1)
|
Havana | 762 nt | |
mRNA |
rnf220a-204
(1)
|
Havana | 694 nt | |
mRNA |
rnf220a-206
(1)
|
Havana | 604 nt | |
mRNA |
rnf220a-207
(1)
|
Ensembl | 1339 nt | |
mRNA |
rnf220a-208
(1)
|
Ensembl | 2707 nt | |
mRNA |
rnf220a-209
(1)
|
Ensembl | 5466 nt |
Interactions and Pathways
No data available
Plasmids
No data available