Gene

vcpkmt

ID

ZDB-GENE-060825-19

Name

valosin containing protein lysine (K) methyltransferase

Symbol

vcpkmt Nomenclature History

Previous Names

im:7159042
mettl21d
zgc:153596

Type

protein_coding_gene

Location

Chr: 17 Mapping Details/Browsers

Description

Orthologous to human VCPKMT (valosin containing protein lysine methyltransferase).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

IMAGE:7159042 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With vcpkmt Human Ortholog

No data available

Associated With vcpkmt Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR019410	Lysine methyltransferase
Homologous_superfamily	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase superfamily

Domain Details Per Protein

Protein	Length	Lysine methyltransferase	S-adenosyl-L-methionine-dependent methyltransferase superfamily
UniProtKB:Q0P413 InterPro	184
UniProtKB:X1WE47 InterPro	223

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	vcpkmt-201 (1) Ensembl	Ensembl	635 nt	Select Tool ZFIN BLAST
mRNA	vcpkmt-203 (1) Ensembl	Ensembl	1,326 nt	Select Tool ZFIN BLAST
ncRNA	vcpkmt-002 (1) Ensembl	Ensembl	719 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations