Gene

arhgef15b

ID

ZDB-GENE-060810-103

Name

Rho guanine nucleotide exchange factor 15b

Symbol

arhgef15b Nomenclature History

Previous Names

im:7158374 (1)
si:dkey-38p12.3

Type

protein_coding_gene

Location

Chr: 12 Mapping Details/Browsers

Description

Predicted to have guanyl-nucleotide exchange factor activity. Orthologous to human ARHGEF15 (Rho guanine nucleotide exchange factor 15).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

IMAGE:7158374 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With arhgef15b Human Ortholog

No data available

Associated With arhgef15b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000219	Dbl homology (DH) domain
Domain	IPR001452	SH3 domain
Domain	IPR001849	Pleckstrin homology domain
Domain	IPR047270	Ephexin-like, PH domain
Family	IPR047271	Ephexin-like
Homologous_superfamily	IPR011993	PH-like domain superfamily
Homologous_superfamily	IPR035899	Dbl homology (DH) domain superfamily
Homologous_superfamily	IPR036028	SH3-like domain superfamily

Domain Details Per Protein

Protein	Length	Dbl homology (DH) domain	Dbl homology (DH) domain superfamily	Ephexin-like	Ephexin-like, PH domain	PH-like domain superfamily	Pleckstrin homology domain	SH3 domain	SH3-like domain superfamily
UniProtKB:A0A8M9Q0N9 InterPro	867
UniProtKB:A0A8M3BE83 InterPro	937
UniProtKB:A0A8M9PTG7 InterPro	937
UniProtKB:A0A8M9PX10 InterPro	867

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	si:dkey-38p12.3-201 (1) Ensembl	Ensembl		4,238 nt	Select Tool
mRNA	si:dkey-38p12.3-202 (1) Ensembl	Ensembl		4,799 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance

Citations