Gene

trim108

ID

ZDB-GENE-060503-670

Name

tripartite motif containing 108

Symbol

trim108 Nomenclature History

Previous Names

si:ch211-154o6.7 (1)
zgc:153797

Type

protein_coding_gene

Location

Chr: 16 Mapping Details/Browsers

Description

Predicted to have zinc ion binding activity.

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With trim108 Human Ortholog

No data available

Associated With trim108 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR017907	Zinc finger, RING-type, conserved site
Domain	IPR000315	B-box-type zinc finger
Domain	IPR001841	Zinc finger, RING-type
Domain	IPR001870	B30.2/SPRY domain
Domain	IPR003879	Butyrophylin-like, SPRY domain
Domain	IPR027370	Zinc finger, RING-type, eukaryotic
Family	IPR050143	Tripartite motif-containing
Homologous_superfamily	IPR013083	Zinc finger, RING/FYVE/PHD-type
Homologous_superfamily	IPR013320	Concanavalin A-like lectin/glucanase domain superfamily
Homologous_superfamily	IPR043136	B30.2/SPRY domain superfamily

Domain Details Per Protein

Protein	Length	B30.2/SPRY domain	B30.2/SPRY domain superfamily	B-box-type zinc finger	Butyrophylin-like, SPRY domain	Concanavalin A-like lectin/glucanase domain superfamily	Tripartite motif-containing	Zinc finger, RING/FYVE/PHD-type	Zinc finger, RING-type	Zinc finger, RING-type, conserved site	Zinc finger, RING-type, eukaryotic
UniProtKB:A0A8M3B1L7 InterPro	334
UniProtKB:Q1LXQ6 InterPro	494

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
antisense	ottdart00000060001 (1) Ensembl	Ensembl		1,478 nt	Select Tool
mRNA	trim108-201 (1) Ensembl	Ensembl		1,751 nt	Select Tool
mRNA	trim108-202 (1) Ensembl	Ensembl		596 nt	Select Tool
mRNA	trim108-204 (1) Ensembl	Ensembl		752 nt	Select Tool
ncRNA	trim108-002 (1) Ensembl	Ensembl		557 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations