ZFIN Gene: tgm1l1

ZFIN ID: ZDB-GENE-060503-139

ZFIN ID: ZDB-GENE-060503-139

GENE EXPRESSION
All Expression Data:	2 figures from Deasey et al., 2011
Wild-type Stages, Structures:	Hatching:Long-pec (48.0h-60.0h) to Adult (90d-730d, breeding adult)
	muscle , notochord , whole organism

MUTANTS AND TARGETED KNOCKDOWNS

Alleles:

sa12888

PHENOTYPE No data available

GENE ONTOLOGY

Ontology	GO Term
Biological Process	peptide cross-linking (more)
Molecular Function	metal ion binding (more)

GO Terms (all 3)

PROTEIN FAMILIES, DOMAINS AND SITES
InterPro:IPR001102 (1) InterPro:IPR002931 (1) InterPro:IPR008958 (1) InterPro:IPR013783 (1) InterPro:IPR013808 (1) InterPro:IPR014756 (1) InterPro:IPR023608 (1)	PROSITE:PS00547 (1)	Pfam:PF00868 (1) Pfam:PF00927 (1) Pfam:PF01841 (1)

TRANSCRIPTS
Type	Name	Length (bp)	Analysis
mRNA	tgm1l1-001 (1)	2685	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT Vega

GENE PRODUCT DESCRIPTION

ANTIBODIES No data available

CONSTRUCTS WITH SEQUENCES FROM tgm1l1 No data available

SEGMENT (CLONE AND PROBE) RELATIONSHIPS

tgm1l1 Contained in:

[BAC] CH211-9D9 (1) (order this)

SEQUENCE INFORMATION

Type	Accession #	Length (bp/aa)	Analysis
RNA	RefSeq:XM_689858 (1)	3402 bp	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT Vega
Genomic	GenBank:AL929335 (1)	173236 bp	Select Tool MegaBLAST Ensembl
Polypeptide	UniProtKB:F1QSQ3 (1)	816 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast Vega Protein Blast
Sequence Clusters	UniGene:78708 (1)

OTHER tgm1l1 GENE PAGES

Gene:566581 (1)

VEGA:OTTDARG00000018074 (1)

Ensembl(Zv9):ENSDARG00000012130 (1)

MAPPING INFORMATION
Chr: 2 Details

ORTHOLOGY No data available

CITATIONS (9)