Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-060503-139
Gene Name: transglutaminase 1 like 1
Gene Symbol: tgm1l1
Previous Names: TG1-81 (1), si:ch211-9d9.3
Location: Chr: 2   Details
Nomenclature History
GENE EXPRESSION
All Expression Data: 2 figures from Deasey et al., 2011
Wild-type Stages, Structures: Hatching:Long-pec (48.0h-60.0h) to Adult (90d-730d, breeding adult)
  muscle, notochord, whole organism
MUTANTS AND TARGETED KNOCKDOWNS
Alleles: sa12888
PHENOTYPE No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process peptide cross-linking (more)
Molecular Function metal ion binding (more)
GO Terms (all 3)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001102 (1)
  • InterPro:IPR002931 (1)
  • InterPro:IPR008958 (1)
  • InterPro:IPR013783 (1)
  • InterPro:IPR013808 (1)
  • InterPro:IPR014756 (1)
  • InterPro:IPR023608 (1)
  • PROSITE:PS00547 (1)
  • Pfam:PF00868 (1)
  • Pfam:PF00927 (1)
  • Pfam:PF01841 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA tgm1l1-001 (1) 2685
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM tgm1l1 No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    tgm1l1 Contained in: [BAC] CH211-9D9 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_689858 (1) 3441 bp
    Genomic GenBank:AL929335 (1) 173236 bp
    Select Tool
    Polypeptide UniProtKB:F1QSQ3 (1) 816 aa
    Sequence Clusters UniGene:78708 (1)
    Sequence Information (all 9)
    OTHER tgm1l1 GENE PAGES
  • Gene:566581 (1)
  • VEGA:OTTDARG00000018074 (1)
  • Ensembl(Zv9):ENSDARG00000012130 (1)
  • ORTHOLOGY No data available
    CITATIONS (10)