ZFIN is now using GRCz12tu for Genomic Data
Gene
cacnb3a
- ID
- ZDB-GENE-060221-2
- Name
- calcium channel, voltage-dependent, beta 3a
- Symbol
- cacnb3a Nomenclature History
- Previous Names
-
- CAB3a (1)
- cacnb3
- Type
- protein_coding_gene
- Location
- Chr: 23 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable high voltage-gated calcium channel activity. Predicted to be involved in calcium ion transport and chemical synaptic transmission. Predicted to be located in cytoplasm and synapse. Predicted to be part of voltage-gated calcium channel complex. Is expressed in nervous system. Orthologous to human CACNB3 (calcium voltage-gated channel auxiliary subunit beta 3).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from Zhou et al., 2008
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR008145 | Guanylate kinase/L-type calcium channel beta subunit |
| Domain | IPR046937 | Voltage-dependent L-type calcium channel subunit beta-1-4, N-terminal A domain |
| Family | IPR000584 | Voltage-dependent calcium channel, L-type, beta subunit |
| Family | IPR008079 | Voltage-dependent calcium channel, L-type, beta-3 subunit |
| Homologous_superfamily | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| Homologous_superfamily | IPR036028 | SH3-like domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Guanylate kinase/L-type calcium channel beta subunit | P-loop containing nucleoside triphosphate hydrolase | SH3-like domain superfamily | Voltage-dependent calcium channel, L-type, beta-3 subunit | Voltage-dependent calcium channel, L-type, beta subunit | Voltage-dependent L-type calcium channel subunit beta-1-4, N-terminal A domain |
|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M2B8T3 | InterPro | 553 | ||||||
| UniProtKB:A0A8M6Z3S8 | InterPro | 441 | ||||||
| UniProtKB:A0A8M2B8T1 | InterPro | 555 | ||||||
| UniProtKB:A2SZ55 | InterPro | 439 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
cacnb3a-201
(1)
|
Ensembl | 2,190 nt | ||
| ncRNA |
cacnb3a-002
(1)
|
Ensembl | 718 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers