Gene

phykpl

ID

ZDB-GENE-051127-33

Name

5-phosphohydroxy-L-lysine phospho-lyase

Symbol

phykpl Nomenclature History

Previous Names

zgc:123007

Type

protein_coding_gene

Location

Chr: 15 Mapping Details/Browsers

Description

Predicted to have pyridoxal phosphate binding activity and transaminase activity. Orthologous to human PHYKPL (5-phosphohydroxy-L-lysine phospho-lyase).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With phykpl Human Ortholog

Disease Ontology Term	Multi-Species Data	OMIM Term	OMIM Phenotype ID
		[?Phosphohydroxylysinuria]	615011

Associated With phykpl Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR049704	Aminotransferases class-III pyridoxal-phosphate attachment site
Family	IPR005814	Aminotransferase class-III
Homologous_superfamily	IPR015421	Pyridoxal phosphate-dependent transferase, major domain
Homologous_superfamily	IPR015422	Pyridoxal phosphate-dependent transferase, small domain
Homologous_superfamily	IPR015424	Pyridoxal phosphate-dependent transferase

Domain Details Per Protein

Protein	Length	Aminotransferase class-III	Aminotransferases class-III pyridoxal-phosphate attachment site	Pyridoxal phosphate-dependent transferase	Pyridoxal phosphate-dependent transferase, major domain	Pyridoxal phosphate-dependent transferase, small domain
UniProtKB:Q2YDQ8 InterPro	447

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	phykpl-201 (1) Ensembl	Ensembl	1,868 nt	Select Tool
ncRNA	phykpl-002 (1) Ensembl	Ensembl	476 nt	Select Tool
ncRNA	phykpl-003 (1) Ensembl	Ensembl	726 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations