Gene
hapln1b
- ID
- ZDB-GENE-050920-1
- Name
- hyaluronan and proteoglycan link protein 1b
- Symbol
- hapln1b Nomenclature History
- Previous Names
-
- hapln1
- id:ibd5023
- wu:fc07e11
- Type
- protein_coding_gene
- Location
- Chr: 10 Mapping Details/Browsers
- Description
- Predicted to enable hyaluronic acid binding activity. Acts upstream of or within cardiac muscle tissue regeneration and sprouting angiogenesis. Predicted to be located in plasma membrane. Predicted to be active in extracellular space; perineuronal net; and synapse. Is expressed in blood island; cardiovascular system; hypochord; and mesoderm. Orthologous to human HAPLN1 (hyaluronan and proteoglycan link protein 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 6 figures from 3 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 1 Figure from Gomez et al., 2009
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000538 | Link domain |
| Domain | IPR003599 | Immunoglobulin domain subtype |
| Domain | IPR007110 | Immunoglobulin-like domain |
| Domain | IPR013106 | Immunoglobulin V-set domain |
| Family | IPR050691 | Hyaluronan-binding Proteoglycan |
| Homologous_superfamily | IPR013783 | Immunoglobulin-like fold |
| Homologous_superfamily | IPR016186 | C-type lectin-like/link domain superfamily |
| Homologous_superfamily | IPR016187 | C-type lectin fold |
| Homologous_superfamily | IPR036179 | Immunoglobulin-like domain superfamily |
Domain Details Per Protein
| Protein | Length | C-type lectin fold | C-type lectin-like/link domain superfamily | Hyaluronan-binding Proteoglycan | Immunoglobulin domain subtype | Immunoglobulin-like domain | Immunoglobulin-like domain superfamily | Immunoglobulin-like fold | Immunoglobulin V-set domain | Link domain |
|---|---|---|---|---|---|---|---|---|---|---|
|
UniProtKB:E7FBW8
|
353 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
hapln1b-201
(1)
|
Ensembl | 4,825 nt | ||
| mRNA |
hapln1b-202
(1)
|
Ensembl | 214 nt | ||
| mRNA |
hapln1b-203
(1)
|
Ensembl | 5,043 nt |
Interactions and Pathways
No data available
Plasmids
No data available